Pan troglodytes (chimpanzee): 740572
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Entry
740572 CDS
T01005
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
740572 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptr03000
]
740572 (SOX17)
Transcription factors [BR:
ptr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
740572 (SOX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HTH_24
Motif
Other DBs
NCBI-GeneID:
740572
NCBI-ProteinID:
XP_001153136
Ensembl:
ENSPTRG00000020254
VGNC:
1161
UniProt:
H2QW62
LinkDB
All DBs
Position
8:52412623..52415627
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AA seq
414 aa
AA seq
DB search
MSSPDAGYASDDQSQTQSALPAVMAGLGPCPWAESLSPIGDMKVKGEAPANSGAPAGAAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGRVAMDGLG
LQFPEQGFPAGPPLLPPHMGGHYRDCQSLGAPPLDGYPLPTPDTSPLDGVDPDPAFFAAP
MPGDCPAAGTYSYAQVSDYAGPPEPPAGPMHPRLGPEPAGPSIPGLLAPPSALHMYYGAM
GSPGAGGGRGFQMQPQHQHQHQHQHHPPGPGQPSPPPEALPCRDGTDPSQPAELLGEVDR
TEFEQYLHFVCKPEMGLSYQGHDSGVNLPDSHGAISSVVSDASSAVYYCNYPDV
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcgggatacgccagtgacgaccagagccagacccagagcgcgctg
cccgcggtgatggccgggctgggcccctgcccctgggccgagtcgctgagccccatcggg
gacatgaaggtgaagggcgaggcgccggcgaacagcggagcgccggccggggccgcgggc
cgagccaagggcgagtcccgtatccggcggccgatgaacgctttcatggtgtgggctaag
gacgagcgcaagcggctggcgcagcagaatccagacctgcacaacgccgagttgagcaag
atgctgggcaaatcgtggaaggcgctgacgctggcggagaagcggcccttcgtggaggag
gcagagcggctgcgcgtgcagcacatgcaggaccaccccaactacaagtaccggccgcgg
cggcgcaagcaggtgaagcggctgaagcgggtggagggcggcttcctgcacggcctggct
gagccgcaggcggccgcgctgggccccgagggcggccgcgtggctatggacggcctgggc
ctccagttccccgagcagggtttccccgccggcccgccgctgctgcctccgcacatgggc
ggccactaccgcgactgccagagtctgggcgcgcctccgctcgacggctacccgttgccc
acgcccgacacgtccccgctggacggcgtggaccccgacccggctttcttcgccgccccg
atgcccggggactgcccggcggccggcacctacagctacgcgcaggtctcggactacgct
ggccccccggagcctcccgcgggtcccatgcacccccgactcggcccagagcccgcgggt
ccctcgattccgggcctcctggcgccacccagcgcccttcacatgtactacggcgcgatg
ggctcgcccggggcgggcggcgggcgcggcttccagatgcagccgcaacaccagcaccag
caccagcaccagcaccaccccccgggccccggacagccgtcgccccctccggaggcactg
ccctgccgggacggcacggaccccagtcagcccgccgagctcctcggggaggtggaccgc
acggaatttgaacagtatctgcacttcgtgtgcaagcctgagatgggcctctcctaccag
gggcatgactccggtgtgaatctccccgacagccacggggccatttcctcggtggtgtcc
gacgccagctccgcggtatattactgcaactatcctgacgtgtga
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