Pan troglodytes (chimpanzee): 741350
Help
Entry
741350 CDS
T01005
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin isoform X1
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04120
Ubiquitin mediated proteolysis
ptr04137
Mitophagy - animal
ptr04141
Protein processing in endoplasmic reticulum
ptr05012
Parkinson disease
ptr05014
Amyotrophic lateral sclerosis
ptr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
741350 (PRKN)
04120 Ubiquitin mediated proteolysis
741350 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
741350 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
741350 (PRKN)
05014 Amyotrophic lateral sclerosis
741350 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
741350 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptr04131
]
741350 (PRKN)
04121 Ubiquitin system [BR:
ptr04121
]
741350 (PRKN)
03029 Mitochondrial biogenesis [BR:
ptr03029
]
741350 (PRKN)
Enzymes [BR:
ptr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
741350 (PRKN)
Membrane trafficking [BR:
ptr04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
741350 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
741350 (PRKN)
Xenophagy
Other xenophagy associated proteins
741350 (PRKN)
Ubiquitin system [BR:
ptr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
741350 (PRKN)
Mitochondrial biogenesis [BR:
ptr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
741350 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
IBR_2
IBR_1
IBR
Rad60-SLD
Rad60-SLD_2
Dsc3_N
Crinkler
Motif
Other DBs
NCBI-GeneID:
741350
NCBI-ProteinID:
XP_001153913
Ensembl:
ENSPTRG00000018781
VGNC:
13029
UniProt:
A0A6D2XY08
H2QU08
LinkDB
All DBs
Position
5:complement(173409300..174820942)
Genome browser
AA seq
465 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDSDTSIFQLKEVVAKRQGVPADQLRVIFAGKELRNDWTVQNCD
LDQQSIVHIVQRPWRKGQEMNATGGDDPRNAAGGCEREPQSLTRVDLSSSVLPGDSVGLA
VILHTDSRKDSPAAGSPAGRSIYNSFYVYCKGPCQRVQPGKLRVQCSTCRQATLTLTQGP
SCWDDVLIPNRMSGECQSPHCPGTSAEFFFKCGAHPTSDKETSVALHLIATNSRNITCIT
CTDVRSPVLVFQCNSRHVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPNSLIKE
LHHFRILGEEQYNRYQQYGAEECVLQMGGVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGC
GFAFCRECKEAYHEGECSALFEASGTTTQAYRVDERAAEQARWEAASKETIKKTTKPCPR
CHVPVEKNGGCMHMKCPQPQCRLEWCWNCGCEWNRVCMGDHWFDV
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtttgtcaggttcaactccagccatggtttcccagtggaggtcgattctgac
accagcatcttccagctcaaggaggtggttgctaagcgacagggggttccggctgaccag
ttgcgtgtgattttcgcagggaaggagctgaggaatgactggactgtgcagaattgtgac
ctggatcagcagagcattgttcacattgtgcagagaccgtggagaaaaggtcaagaaatg
aatgcaactggaggcgatgaccccagaaacgcggcgggaggctgtgagcgggagccccag
agcttgactcgggtggacctcagcagctcagtcctcccaggagactctgtggggctggct
gtcattctgcacactgacagcaggaaggactcaccagcagctggaagtccagcaggtaga
tcaatctacaacagcttttatgtgtattgcaaaggcccctgtcaaagagtgcagccggga
aaactcagggtacagtgcagcacctgcaggcaggcaacgctcaccttgacccagggtcca
tcttgctgggatgatgttttaattccaaaccggatgagtggtgaatgccaatccccacac
tgccctgggactagtgcagaatttttctttaaatgtggagcacaccccacctctgacaag
gaaacatcagtagctttgcacctgatcgcaacaaatagtcggaacatcacttgcattacg
tgcacagacgtcaggagccccgtcctggttttccagtgcaactcccgccacgtgatttgc
ttagactgtttccacttatactgtgtgacaagactcaatgatcggcagtttgttcacgac
cctcaacttggctactccctgccttgtgtggctggctgtcccaactccttgattaaagag
ctccatcacttcaggattctgggagaagagcagtacaaccggtaccagcagtatggtgca
gaggagtgtgtcctgcagatggggggcgtgttatgcccccgccctggctgtggagcgggg
ctgctgccggagcctgaccagaggaaagtcacctgcgaagggggcaatggcctgggctgt
gggtttgccttctgccgggaatgtaaagaagcgtaccatgaaggggagtgcagtgcccta
tttgaagcctcaggaacaactactcaggcctacagagtcgatgaaagagccgcagagcag
gctcgttgggaagcagcctccaaagaaaccatcaagaaaaccaccaagccctgtccccgc
tgccatgtaccagtggaaaaaaatggaggctgcatgcacatgaagtgtccacagccccag
tgcaggctcgagtggtgctggaactgtggctgcgagtggaaccgcgtctgcatgggggac
cactggttcgacgtgtag
DBGET
integrated database retrieval system
