Pan troglodytes (chimpanzee): 742589
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Entry
742589 CDS
T01005
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03013
Nucleocytoplasmic transport
ptr03015
mRNA surveillance pathway
ptr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
742589
09122 Translation
03013 Nucleocytoplasmic transport
742589
03015 mRNA surveillance pathway
742589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
742589
03041 Spliceosome [BR:
ptr03041
]
742589
03009 Ribosome biogenesis [BR:
ptr03009
]
742589
03012 Translation factors [BR:
ptr03012
]
742589
Enzymes [BR:
ptr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
742589
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
742589
mRNA cycle factors
Stress granule specific factors
742589
Spliceosome [BR:
ptr03041
]
Complex C
Other components
EJC/TREX
742589
Ribosome biogenesis [BR:
ptr03009
]
Eukaryotic type
90S particles
Helicases
742589
Translation factors [BR:
ptr03012
]
Eukaryotic type
Initiation factors
eIF-4
742589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
742589
NCBI-ProteinID:
NP_001267314
UniProt:
G2HJD5
LinkDB
All DBs
Position
17:complement(73268608..73277686)
Genome browser
AA seq
411 aa
AA seq
DB search
MATTATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQINKGRDVIAQSQSGTGKTATLSISVLQCLDIQLRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRRLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGTSRVLISTDVWARGLDVPQVSLIINYDLPNNREL
SIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccacggccacgatggcgacctcgggctcggcgcgaaagcggctgctcaaagag
gaagacatgactaaagtggaattcgagaccagcgaggaggtggatgtgacccccacgttc
gacaccatgggcctgcgggaggacctgctgcggggcatctacgcttacggttttgaaaaa
ccatcagcaatccagcaacgagcaatcaagcagatcaacaaagggagagatgtcatcgca
cagtctcagtccggcacaggaaaaacagccaccttgagtatctcagtcctccagtgtttg
gatattcagcttcgtgaaactcaagctttgatcttggctcccacaagagagttggctgtg
cagatccagaaggggctgcttgctctcggtgactacatgaatgtccagtgccatgcctgc
attggaggcaccaatgttggcgaggacatcaggaagctggattatggacagcatgttgtc
gcgggcactccagggcgtgtttttgatatgattcgtcgcagaaggctaaggacacgtgct
atcaaaatgttggttttggatgaagctgatgaaatgttgaataaaggtttcaaagagcag
atttacgatgtatacaggtacctgcctccagccacacaggtggttctcatcagtgccacg
ctgccacacgagattctggagatgaccaacaagttcatgaccgacccaatccgcatcttg
gtgaaacgtgatgaattgactctggaaggcatcaagcaatttttcgtggcagtggagagg
gaagagtggaaatttgacactctgtgtgacctctacgacacactgaccatcactcaggcg
gtcatcttctgcaacaccaaaagaaaggtggactggctgacggagaaaatgagggaagcc
aacttcaccgtatcctcgatgcatggagacatgccccagaaagagcgggagtccatcatg
aaggagttccggtcgggcaccagccgagtgcttatttctacagacgtctgggccaggggg
ttggatgtccctcaggtgtccctcatcattaactacgatctccccaataacagagaattg
tccatacacagaattgggagatctggtcgatacggccggaagggtgtggccattaacttt
gtaaagaatgacgacatccgcatcctcagagatatcgagcagtactattccactcagatt
gatgagatgccgatgaacgttgctgatcttatctga
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