KEGG   Pan troglodytes (chimpanzee): 742628
Entry
742628            CDS       T01005                                 
Symbol
WHRN
Name
(RefSeq) whirlin isoform X2
  KO
K21879  whirlin
Organism
ptr  Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:ptr03037]
    742628 (WHRN)
Cilium and associated proteins [BR:ptr03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   742628 (WHRN)
SSDB
Motif
Pfam: PDZ PDZ_6 PDZ_2 HHD_RTEL1 USH1C_N CCM2_C PAH_ZNF598
Other DBs
NCBI-GeneID: 742628
NCBI-ProteinID: XP_016817009
Ensembl: ENSPTRG00000021289
VGNC: 10447
LinkDB
Position
11:23947169..24052209
AA seq 906 aa
MNAPLDGLSVSSSSTGSLGSAAGAGGGGGAGLRLLSANVRQLHQALTALLSEAEREQFTH
CLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPATT
PYRQPAWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKE
GLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRIPGGYVTNHIYTWVDPQ
GRSISPPSGLPQPHGGVLRQQEGDRRTTLHLLQGRDEKKVNLVLGDGRSLGLTIRGGAEY
GLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKSSRHLILTVKDVG
RLPHARTTVDETKWIASSRIGETMANSAGFLGDLTTEGINKPGFYKGPAGSQVTLSSLGN
QTRVLLEEQARHLLNEQERTTMAYYLDEYRGGSVSVEALVMALFELLNTHAKFSLLSEVR
GTISPQDLERFDHLVLRREIESMKARQPPGPGAGDTYSMVSYSDTGSSTGSHGTSTTVSS
ARNTLDLEETGEAVQGNINALPDVSVDDVRSTSQGLSSFKPLPPPPPLAQGNDRPLGQPR
KLGREDLQPPSSTPSCSGTVFSAPQNRSPPAGTAPTPGTSSAQDLPSSPIYASVSPANPS
SKRPLDAHLALVNQHPIGPFPRVQSPPHLKSPSAEATVAGGCLPPPSPSGHPDQTGTNQH
FVMVEVHRPDSEPDVNEVRALPQTRTSTLSQLSDSGQTLSEDSGVDAGEAEASAPGRGRQ
SASTKSRSSKELPRNERPTDGANKPPGLLEPTSTLVRVKKSAATLGIAIEGGANTRQPLP
RIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVT
EFNVML
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgaacgcgccgctggacggcctgtcggtgagctcgtcctccaccggctcgctgggctcg
gcggccggggcgggcggcggcgggggcgcggggctgcggttactgtctgccaacgtgcgc
cagctgcaccaggcgctgaccgcgctgctgagcgaggcggagcgggagcagttcacccac
tgcctgaacgcttaccacgcgcgccgcaacgtcttcgacctggtccgcaccttgcgcgtg
ctgctggatagtccggtcaagcggcgcctgctgcccatgcttcgtctggtcatcccgcgc
tccgaccagctgctcttcgaccaatacacggccgagggcctctacctgcccgccaccacc
ccctacaggcagcccgcctggggcggccccgacggcgcggggccaggggaggtgcgcctg
gtgagtttgcggcgtgccaaggcccacgagggcttgggcttcagcatccgtgggggctcg
gagcacggcgtgggcatctacgtgtctctggtggaaccaggctctctagctgagaaggaa
ggactgcgggtcggggaccagattctgcgcgtcaacgacaaatccctggcccgggtgacc
cacgcggaggccgtcaaggctctgaagggctccaagaagctggtgctgtctgtgtactca
gcagggcgcatccccgggggctacgtcaccaaccacatctacacctgggtggacccgcag
ggccgcagcatctccccaccctcgggcctgccccagccccacggtggtgtcctgagacag
caggagggtgaccggaggaccaccctgcacctcctgcaaggaagggatgagaaaaaggtg
aacctggtgctgggggacggccggtccctgggcctcacgatccgtgggggagctgagtac
ggccttggcatttacatcactggcgtggacccaggctctgaagcagaaggcagcgggctc
aaggttggggaccagattctagaagtgaatgggcggagctttctcaacatcctacacgac
gaggcggtcaggctgcttaagtcatctcggcacctcatcctgacagtgaaggacgtcggg
aggctgccccatgcccgcaccactgtggacgagaccaagtggatcgccagttcccggatt
ggggagaccatggcgaactcggcagggtttcttggcgatctcacaacagaaggaataaac
aagccaggattttacaagggcccagccggctcccaggtgaccctgagcagcctggggaac
cagacacgagtgctgctggaggagcaggctcggcacctgctgaacgagcaggaacgcacc
accatggcctactacctggatgagtaccgtggcggcagcgtctctgtggaggccctcgtc
atggccctgttcgagctgctcaacacccacgccaagttctcactcctctctgaggtgaga
ggcaccatttccccgcaagacctagaacgcttcgaccacctggtgctgaggcgtgagatt
gagtccatgaaggcgcggcagcccccaggccccggggctggggacacctactccatggtc
tcctacagtgacacgggttcatccacaggcagccacggcacctccaccaccgtcagctcg
gccaggaacactctggacctggaggaaactggcgaggctgtccagggcaatatcaacgcc
ctcccagatgtgtccgtggatgatgtcagatccacctcccaggggctgtcaagcttcaag
ccactgcctcccccaccacctctggcccaaggcaacgaccgcccactaggccagccaagg
aagctggggagagaggacctccagccaccttcctccacgccttcctgctcgggcactgtc
ttctcggctccacagaaccgcagcccgccagcgggcaccgcacccaccccagggacctcc
tctgcacaggacttgccctcttcccccatctatgcctccgtctcccctgccaaccccagc
tccaagaggccgctggacgcccatctggccctggtcaaccaacaccccatcggccccttc
ccgcgggtccagtcacccccgcacctgaaaagcccctctgcagaggccacagtggctggg
ggctgccttccgcccccatcaccctctggccacccagaccagacaggcacaaaccagcac
tttgtcatggtggaggtccaccgccccgacagcgagccagacgtcaatgaagtgagggcg
ctgccccagacgcgcacctctacgctctcccagctctcggacagcgggcagactctaagc
gaggacagtggtgtggatgctggcgaggcagaggccagcgccccaggccgaggaaggcag
tcggcgtccaccaagagcaggagtagcaaggagctgcctcggaacgagaggcccacagat
ggggccaacaaaccgcctggacttctggagcccacgtccactctggtccgtgtgaagaaa
agtgcggccaccctgggcatcgccatcgagggtggcgccaacacccgccagcccctgcct
aggattgtcactattcagagaggcggctcagctcacaactgtgggcagctcaaggtgggc
cacgtgatcctggaagtgaatgggctgacgcttcggggcaaggagcaccgggaggccgcc
cgcattatcgccgaggccttcaagactaaggaccgtgactacattgactttctggtcact
gagttcaatgtgatgctctag

DBGET integrated database retrieval system