Pan troglodytes (chimpanzee): 742628
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Entry
742628 CDS
T01005
Symbol
WHRN
Name
(RefSeq) whirlin isoform X2
KO
K21879
whirlin
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptr03037
]
742628 (WHRN)
Cilium and associated proteins [BR:
ptr03037
]
Primary cilia and associated proteins
USH complex and associated proteins
742628 (WHRN)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
HHD_RTEL1
USH1C_N
CCM2_C
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
742628
NCBI-ProteinID:
XP_016817009
Ensembl:
ENSPTRG00000021289
VGNC:
10447
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All DBs
Position
11:23947169..24052209
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AA seq
906 aa
AA seq
DB search
MNAPLDGLSVSSSSTGSLGSAAGAGGGGGAGLRLLSANVRQLHQALTALLSEAEREQFTH
CLNAYHARRNVFDLVRTLRVLLDSPVKRRLLPMLRLVIPRSDQLLFDQYTAEGLYLPATT
PYRQPAWGGPDGAGPGEVRLVSLRRAKAHEGLGFSIRGGSEHGVGIYVSLVEPGSLAEKE
GLRVGDQILRVNDKSLARVTHAEAVKALKGSKKLVLSVYSAGRIPGGYVTNHIYTWVDPQ
GRSISPPSGLPQPHGGVLRQQEGDRRTTLHLLQGRDEKKVNLVLGDGRSLGLTIRGGAEY
GLGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKSSRHLILTVKDVG
RLPHARTTVDETKWIASSRIGETMANSAGFLGDLTTEGINKPGFYKGPAGSQVTLSSLGN
QTRVLLEEQARHLLNEQERTTMAYYLDEYRGGSVSVEALVMALFELLNTHAKFSLLSEVR
GTISPQDLERFDHLVLRREIESMKARQPPGPGAGDTYSMVSYSDTGSSTGSHGTSTTVSS
ARNTLDLEETGEAVQGNINALPDVSVDDVRSTSQGLSSFKPLPPPPPLAQGNDRPLGQPR
KLGREDLQPPSSTPSCSGTVFSAPQNRSPPAGTAPTPGTSSAQDLPSSPIYASVSPANPS
SKRPLDAHLALVNQHPIGPFPRVQSPPHLKSPSAEATVAGGCLPPPSPSGHPDQTGTNQH
FVMVEVHRPDSEPDVNEVRALPQTRTSTLSQLSDSGQTLSEDSGVDAGEAEASAPGRGRQ
SASTKSRSSKELPRNERPTDGANKPPGLLEPTSTLVRVKKSAATLGIAIEGGANTRQPLP
RIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVT
EFNVML
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccgctggacggcctgtcggtgagctcgtcctccaccggctcgctgggctcg
gcggccggggcgggcggcggcgggggcgcggggctgcggttactgtctgccaacgtgcgc
cagctgcaccaggcgctgaccgcgctgctgagcgaggcggagcgggagcagttcacccac
tgcctgaacgcttaccacgcgcgccgcaacgtcttcgacctggtccgcaccttgcgcgtg
ctgctggatagtccggtcaagcggcgcctgctgcccatgcttcgtctggtcatcccgcgc
tccgaccagctgctcttcgaccaatacacggccgagggcctctacctgcccgccaccacc
ccctacaggcagcccgcctggggcggccccgacggcgcggggccaggggaggtgcgcctg
gtgagtttgcggcgtgccaaggcccacgagggcttgggcttcagcatccgtgggggctcg
gagcacggcgtgggcatctacgtgtctctggtggaaccaggctctctagctgagaaggaa
ggactgcgggtcggggaccagattctgcgcgtcaacgacaaatccctggcccgggtgacc
cacgcggaggccgtcaaggctctgaagggctccaagaagctggtgctgtctgtgtactca
gcagggcgcatccccgggggctacgtcaccaaccacatctacacctgggtggacccgcag
ggccgcagcatctccccaccctcgggcctgccccagccccacggtggtgtcctgagacag
caggagggtgaccggaggaccaccctgcacctcctgcaaggaagggatgagaaaaaggtg
aacctggtgctgggggacggccggtccctgggcctcacgatccgtgggggagctgagtac
ggccttggcatttacatcactggcgtggacccaggctctgaagcagaaggcagcgggctc
aaggttggggaccagattctagaagtgaatgggcggagctttctcaacatcctacacgac
gaggcggtcaggctgcttaagtcatctcggcacctcatcctgacagtgaaggacgtcggg
aggctgccccatgcccgcaccactgtggacgagaccaagtggatcgccagttcccggatt
ggggagaccatggcgaactcggcagggtttcttggcgatctcacaacagaaggaataaac
aagccaggattttacaagggcccagccggctcccaggtgaccctgagcagcctggggaac
cagacacgagtgctgctggaggagcaggctcggcacctgctgaacgagcaggaacgcacc
accatggcctactacctggatgagtaccgtggcggcagcgtctctgtggaggccctcgtc
atggccctgttcgagctgctcaacacccacgccaagttctcactcctctctgaggtgaga
ggcaccatttccccgcaagacctagaacgcttcgaccacctggtgctgaggcgtgagatt
gagtccatgaaggcgcggcagcccccaggccccggggctggggacacctactccatggtc
tcctacagtgacacgggttcatccacaggcagccacggcacctccaccaccgtcagctcg
gccaggaacactctggacctggaggaaactggcgaggctgtccagggcaatatcaacgcc
ctcccagatgtgtccgtggatgatgtcagatccacctcccaggggctgtcaagcttcaag
ccactgcctcccccaccacctctggcccaaggcaacgaccgcccactaggccagccaagg
aagctggggagagaggacctccagccaccttcctccacgccttcctgctcgggcactgtc
ttctcggctccacagaaccgcagcccgccagcgggcaccgcacccaccccagggacctcc
tctgcacaggacttgccctcttcccccatctatgcctccgtctcccctgccaaccccagc
tccaagaggccgctggacgcccatctggccctggtcaaccaacaccccatcggccccttc
ccgcgggtccagtcacccccgcacctgaaaagcccctctgcagaggccacagtggctggg
ggctgccttccgcccccatcaccctctggccacccagaccagacaggcacaaaccagcac
tttgtcatggtggaggtccaccgccccgacagcgagccagacgtcaatgaagtgagggcg
ctgccccagacgcgcacctctacgctctcccagctctcggacagcgggcagactctaagc
gaggacagtggtgtggatgctggcgaggcagaggccagcgccccaggccgaggaaggcag
tcggcgtccaccaagagcaggagtagcaaggagctgcctcggaacgagaggcccacagat
ggggccaacaaaccgcctggacttctggagcccacgtccactctggtccgtgtgaagaaa
agtgcggccaccctgggcatcgccatcgagggtggcgccaacacccgccagcccctgcct
aggattgtcactattcagagaggcggctcagctcacaactgtgggcagctcaaggtgggc
cacgtgatcctggaagtgaatgggctgacgcttcggggcaaggagcaccgggaggccgcc
cgcattatcgccgaggccttcaagactaaggaccgtgactacattgactttctggtcact
gagttcaatgtgatgctctag
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