KEGG   Pan troglodytes (chimpanzee): 742901
Entry
742901            CDS       T01005                                 
Name
(RefSeq) LOW QUALITY PROTEIN: WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
ptr  Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptr03041]
    742901
Spliceosome [BR:ptr03041]
 Complex B
  Other components
   Complex B specific factors
    742901
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd LisH_TPL Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_Vps41 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_NWD2_C Ge1_WD40 Beta-prop_HPS5 Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_BBS7 Beta-prop_EIPR1 Beta-prop_IP5PC_F Beta-prop_VPS8 DUF7165 Beta-prop_SCAP Beta-prop_NOL10_N LisH_PAC1 LisH zf_topless
Other DBs
NCBI-GeneID: 742901
NCBI-ProteinID: XP_054543114
LinkDB
Position
1:92139303..92141235
AA seq 512 aa
MLIKIESSDVIHLIMQYLKENSLHQALATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQIVLELIELRELGAARSLLRQTDPMIMLKQTQPEQYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQALKWQQHQGLLPP
GMTIDLFXGKAAVKDVEEEKFPTQLSRHIKFGQKSQVECARFSPDGQYLVTGSVDGLTEV
WNFTTRKIRKDLKYQAQDNFMMMDDAVLCMCFSRDTEMLANGAQDGKIKVWKIQSRQYLR
RYERAHSKGVTCLSFSEDSSQILSASFDQTIRIHGLKSGKTLKEFCSHSSFVNKATFTQD
GHYIISASSDGTVKIWNMKTTECSNTFKSLGSTAGTDITVNSVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRNFSSGKREGGDFXCALSPRGEWIYCVGEDFVLYCFSTATGKLERTLT
VHKKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1538 nt   +upstreamnt  +downstreamnt
atgttgatcaaaattgaatcttcggatgtgatccaccttatcatgcagtacttgaaggag
aacagtttacatcaggcattagccaccttgcaggaggagactactgtgtctctgaatact
gtggacagcattgagagttttgtggctgacattaacagtggccattgggatactgtgttg
caggctatacagtctctgaaattgccagacaaaaccctcattgacctctatgaacagatt
gttctggaattgatagagctccgtgaattgggtgctgccaggtcactattgagacagact
gatcccatgatcatgttaaaacaaacacagccagagcaatatattcatctggagaacctt
ttggccaggtcttactttgatcctcgtgaggcatacccagatggaagtagcaaagaaaag
agaagagcagcaattgcccaggccttggctggtgaagtcagtgtggtgcctccatctcgt
ctcatggcactgctgggacaggcactgaagtggcagcagcatcagggattgcttcctcct
ggtatgaccatagatttgttttgaggcaaagcagctgtcaaagatgtggaagaagaaaag
tttcctacacaactgagcaggcatattaagtttggtcagaaatcacaagtggagtgtgct
cgattttctccagatggtcagtatttggtcactgggtctgttgatggactcactgaagta
tggaactttactactagaaaaatcagaaaggatcttaagtaccaggcccaggataacttt
atgatgatggatgatgctgtcctctgcatgtgtttcagcagagatacagaaatgttagca
aatggggcccaagatggaaaaatcaaggtatggaagattcagagcagacaatatttaagg
agatatgagagggcacacagtaagggtgtcacgtgtctaagcttttctgaggatagcagt
cagatccttagtgcttcttttgaccagacaattagaattcatggtttaaaatctgggaaa
accctgaaggaattttgtagccattcctcctttgttaacaaagcaacatttacacaagat
ggacattatattattagtgcatcctctgatggcactgtaaagatctggaatatgaagacc
acagaatgttcaaatacctttaaatccctgggcagcactgcagggacagatattactgtc
aacagtgtgattctacttcctaaaaatcctgagcactttgtggtgtgcaacagatcaaac
acagtggtcatcatgaacatgcaggggcagattgtcagaaacttcagttctggtaaaaga
gaaggtggggacttttctgtgccctctctccccgtggtgaatggatctactgtgtagggg
aggactttgtgctctactgtttcagtacagccactggcaaactggagagaactttgacag
tgcacaagaaggatgtgattggtattgcacatcaccctcatcagaacctgattgctacct
acagtgaagatggactcctaaagctctggaaaccataa

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