Pan troglodytes (chimpanzee): 743539
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Entry
743539 CDS
T01005
Symbol
SAMD4A
Name
(RefSeq) protein Smaug homolog 1 isoform X8
KO
K27396
protein Smaug
Organism
ptr
Pan troglodytes (chimpanzee)
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
743539 (SAMD4A)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
743539 (SAMD4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
SAM_3
Motif
Other DBs
NCBI-GeneID:
743539
NCBI-ProteinID:
XP_009426107
Ensembl:
ENSPTRG00000006364
VGNC:
3318
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All DBs
Position
15:52560702..52783387
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AA seq
666 aa
AA seq
DB search
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLER
EANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKVEYMKLLPKILAHSIEHNQHIE
ESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGGQNRGRSDSVDYGQTHYYHQR
QNSDDKLNGWQNSRDSGICINASNWQDKSMGCENGHVPLYSSSSVPTTINTIGTSTSTNV
PAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLLK
SLERDIIEGGSLRIPLQELHQMILTPIKAYSSPSTTPEARRREPQAPRQPSLMGPESQSP
DCKDGAAATGATATPSAGASGGLQPHQLSSCDGELAVAPLPEGDLPGQFTRVMGKVCTQL
LVSRPDEENISSYLQLIDKCLIHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGYR
QQRNRGFGQSNSLPTAGSVGGGMGRRNPRQYQIPSRNVPSARLGLLGTSGFVSSNQRNTT
AAPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQRTRSLPVHTSPQNMLMFQQPGSQVHSG
LCLTDLRGWLSLSGAPSMPALTVPKSSQGEFQLPVTEPDINNRLESLCLSMTEHALGDGV
DRTSTI
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgcgaccaggtcggggtgctggcgggctggtttaagggctggaacgagtgc
gagcagactgttgcgctgctgtcgctgctcaagcgcgtgagccagacccaggcccgcttc
ctccagctctgcctggagcactcgctggccgactgcgccgagctgcacgtcctcgaacgc
gaggccaacagccccggaatcattaaccaatggcaacaggaatccaaggataaagtgatt
tccctcctgttaactcatctgcctttgctgaagccaggaaaccttgacgcaaaagtagaa
tatatgaaactactgcccaaaatcctggctcactctattgaacacaaccagcacattgag
gagagcaggcagctgctgtcctatgctttgatacatccagccacttcgttagaagaccgt
agtgctttagccatgtggctgaatcacttggaggaccgcacatcgaccagctttggtggc
cagaaccgaggccgctcagactctgtggattatggacagacacactactatcaccaaaga
cagaactctgatgacaagctcaatgggtggcagaactctcgggattctgggatttgcatc
aatgcctccaactggcaggacaaaagcatggggtgtgagaatggccatgtgcccctctac
tcctcctcatctgtccccaccacaatcaatacgattggaaccagcacaagtacaaatgtt
ccagcctggctaaaaagcctccgcctgcacaaatatgccgcgcttttctcccagatgacc
tatgaggagatgatggccctcaccgagtgccagctggaggcgcagaatgttaccaaaggt
gcaagacacaaaattgtcatcagtattcagaagctcaaagaaagacaaaatctcctgaag
tctttggaaagggacatcatcgaggggggcagcctgcgcatcccgctccaggaactgcac
cagatgatcctgactccgatcaaggcctacagctccccgagcaccacccccgaggctcgc
cgccgggagccccaggccccgcgtcagccctcactgatgggccccgagagccagagcccc
gactgcaaagatggggccgcagccactggtgccacggccaccccctcggccggggccagc
ggggggctccagccgcaccagctgagcagctgcgatggggagctggccgtcgccccgctg
ccggagggggacctccccgggcagttcacacgcgtcatggggaaagtgtgcacacagctc
ttggtctccagacctgatgaggaaaatataagttcctatttacagctcatagacaagtgt
ctaattcatgaggcatttacagagacacagaaaaaaagattgttgtcatggaaacagcag
gtgcagaagctctttcggtctttccctcggaaaacccttctagacatatcaggatatcga
cagcaaagaaatcgaggctttgggcaatccaactccctcccgacggctggctctgtgggc
ggtggcatgggcagacggaacccgcgccagtaccagatcccctctcggaacgtcccttcc
gcccgcctgggcctcttgggcaccagtggattcgtcagctccaaccagcgcaacaccaca
gctgcccccaccatcatgaaacaaggaagacagaacctgtggtttgccaaccccgggggc
agcaatagcatgccaagccgcacccacagctcagtccagaggacccgctcgctgcccgtg
cacacttccccacagaacatgctgatgttccagcagccaggttcccaagttcacagtgga
ctgtgtttaacagaccttagaggttggttgagcctgagtggagccccttccatgccagcg
ctgacagtccccaagtcctcccagggagaattccagcttcccgtgaccgaacctgacatc
aacaacaggctggagtcgttgtgcctcagtatgaccgaacacgccctgggagacggggtt
gaccggacctccaccatctag
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