KEGG   Pan troglodytes (chimpanzee): 744649
Entry
744649            CDS       T01005                                 
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03013  Nucleocytoplasmic transport
ptr03015  mRNA surveillance pathway
ptr03040  Spliceosome
ptr05014  Amyotrophic lateral sclerosis
ptr05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    744649 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    744649 (ALYREF)
   03015 mRNA surveillance pathway
    744649 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    744649 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    744649 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptr03019]
    744649 (ALYREF)
   03041 Spliceosome [BR:ptr03041]
    744649 (ALYREF)
Messenger RNA biogenesis [BR:ptr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     744649 (ALYREF)
    TREX complex
     744649 (ALYREF)
Spliceosome [BR:ptr03041]
 Complex C
  Other components
   EJC/TREX
    744649 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    744649 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT F07F6_N
Other DBs
NCBI-GeneID: 744649
NCBI-ProteinID: XP_016786425
Ensembl: ENSPTRG00000009774
VGNC: 6332
UniProt: H2QE34 A0ACM8R5S8
LinkDB
Position
19:complement(95240599..95244357)
AA seq 264 aa
MPDSAPAMADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGG
PIRNRPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNL
DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG
RPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGAGGFGGGGGTRRGTRGGARGRGRGAGRN
SKQQLSAEELDAQLDAYNARMDTS
NT seq 795 nt   +upstreamnt  +downstreamnt
atgcccgattccgcgcccgccatggccgacaaaatggacatgtctctggacgacatcatt
aaactgaaccggagccagcgaggcggccggggcgggggccggggccgcggccgggccggc
tcccagggcggccgcggcggtggggcgcaggccgccgcgcgagtgaatcgaggcggcggg
cccatccggaaccggccggccatcgcccgcggcgcggccggcggaggcggcaggaaccga
ccggcgccctacagcaggccaaaacaacttcccgacaagtggcagcacgatcttttcgac
agtggcttcgggggtggtgccggcgtggagacaggtgggaaactgctggtgtccaatctg
gattttggagtctcagacgccgatattcaggaactctttgctgaatttggaacgctgaaa
aaggcggctgtacactatgatcgctctggtcgcagcttaggaacagcagacgtgcacttt
gagcggaaggcagatgccctgaaggccatgaagcagtacaacggcgtccctctggatggc
cgccccatgaacattcagcttgtcacatcacagattgacacacagcggagacctgcacag
agcgtaaacagaggtggcatgactagaaaccgtggcgctggaggttttggtggtggtgga
ggcacccggagaggcacccgtggaggcgcccgtggaagaggcagaggtgccggcaggaat
tcaaagcagcagctttcggcagaggagctggatgcccagctggacgcctataatgcgaga
atggacaccagttaa

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