KEGG   Pan troglodytes (chimpanzee): 747984
Entry
747984            CDS       T01005                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
ptr  Pan troglodytes (chimpanzee)
Pathway
ptr03018  RNA degradation
ptr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    747984 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    747984 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptr03019]
    747984 (LSM4)
   03041 Spliceosome [BR:ptr03041]
    747984 (LSM4)
Messenger RNA biogenesis [BR:ptr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     747984 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     747984 (LSM4)
Spliceosome [BR:ptr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    747984 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 747984
NCBI-ProteinID: XP_016790997
Ensembl: ENSPTRG00000031470
VGNC: 55586
UniProt: A0A6D2W5G4 K6ZIP9
LinkDB
Position
20:complement(20959425..20975827)
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttcccttgtcactgctgaagacggctcagaatcaccccatgttggtggagctgaaa
aatggggagacgtacaatggacacctggtgagctgcgacaactggatgaacattaacctg
cgagaagtcatctgcacgtccagggacggggacaagttctggcggatgcccgagtgctac
atccgcggcagcaccatcaagtacctgcgcatccccgacgagatcatcgacatggtcaag
gaggaggtggtggccaagggccgcggccgcggaggcctgcagcagcagaagcagcagaaa
ggccgcggcatgggcggcgctggccgaggtgtgtttggtggccggggccgaggtgggatc
ccgggcacaggcagaggccagccagagaagaagcctggcagacaggcgggcaaacagtga

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