Puccinia triticina (wheat leaf rust): PtA15_15A348
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Entry
PtA15_15A348 CDS
T09180
Name
(RefSeq) uncharacterized protein
KO
K15083
DNA repair protein RAD16
Organism
ptrc
Puccinia triticina (wheat leaf rust)
Brite
KEGG Orthology (KO) [BR:
ptrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrc03400
]
PtA15_15A348
DNA repair and recombination proteins [BR:
ptrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
PtA15_15A348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
ResIII
zf-C3HC4_2
zf-C3HC4_3
DEAD
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-rbx1
HDA2-3
zf-ANAPC11
Prok-RING_4
AAA_34
zf-RING_6
zf-Nse
DEAD_2
Motif
Other DBs
NCBI-GeneID:
77804440
NCBI-ProteinID:
XP_053027510
LinkDB
All DBs
Position
15A:complement(join(3554428..3554500,3554614..3554727,3554815..3554850,3554944..3555183,3555291..3555530,3555623..3555844,3555950..3556033,3556117..3556335,3556428..3558098,3558190..3558413))
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AA seq
1040 aa
AA seq
DB search
MGNPIPTRRSARLSNCLSKTPATKNDPDPELTHSASVEPCDPKTTSRNKRKRVADDELPT
AVAQGPRTVRRGHSNSNKAVKEEPVVRVAKRTTSLSSHYFKGDKSESAKNDSKVESLKDA
LDKDTCEESDVQASRNTTTTKDKAKATRAESSHHLDADKGKASRAGTDAPDSDDISLVDR
ARAMKSKLLKAQEEAATILQSAKTCKLKGKGKARQIDTTSEEGSESEDKIALTRPRTNGR
RSALSRSKLLESDEDPSEIESEMVKAAIELSKKDSVAATSRPKGSSSTKVASTNSRRVRA
AIDKEDDEDSDFEADSDHEIDSSLSTLDSDSDSSDESNSPQNRSHKSSKPAVSPKAKRPR
TRRVKIPKHLTWWEKNQIKLETHHPELVNVWGDLSEKVKVVEPSKAEQPDGLELTLLPFQ
LEGLYWMKKQEAGPWSGGVLADEMGMGKTIQTIALILSDRVPGHRKQTLVIAPTVAIMQW
RNEIEKFAKGLTVNVWHGGNRSSAQEEMESFDVVLTSFAVLESAFRRQNSGYRRKGQILK
ESSLLHQIEWHRVILDEAHNIKDRSCNTAKGAFELKAKYRWCLSGTPLQNRVGELYSLIR
FLGADPFSYYFCKLCDCKSLHWSFSDRRSCDQCKHSPMQHICFWNNEILKPVQKYGASVV
GSHGHTAFNKLKVLLDRMMLRRTKLERADDLGLPPRAVLVRRDYFTEEEEELYSSLYSDV
TRKFSTYADAGTVLNNYGNIFQLITRMRQMSNHPDLVLKSRAAQAAFKTIGDANAPNTDL
NQLTSIQTCRICLDEAEDAIISRCRHIFCRECIRQYLETATEQEPECPVCHLPITIDLSQ
DALEDENMGSKARQGVLDRLDPGKWRTSTKIEALVEELSKLNQSDHTIKSIVFSQFTVFL
DLIERRLQLAGFKLARLQGNMTPEARNRTIQYFMNNNDVQVFLVSLKAGGVALNLTEASR
VFIMDPWWNPAVELQAMDRIHRLGQHRPVVVTRLIIENSIESRIVELQKKKEAMTGAALG
DDDQALGRLTPEDLSFLFTL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgggcaatccgattcctactcgtcgatctgctcgtctgtcgaattgtctttcaaagact
ccagctaccaaaaatgacccagacccagaactgacccactctgccagtgtcgaaccatgt
gatccgaagactacctctaggaataaaaggaaacgcgtcgccgatgatgagctgccaaca
gccgtagcgcaagggcctagaacggtccgacgtggtcattcaaattccaacaaggctgtc
aaggaagagccggtggtccgggttgccaagcgtacaacatctctatcctcgcactacttc
aaaggtgataagtcggaaagcgcaaagaatgacagcaaggtcgagtccctgaaagacgcg
ttggacaaggatacttgtgaagaaagcgatgttcaggcttctagaaacaccactacaacg
aaggacaaggcaaaagctacccgagccgagagttcgcatcatcttgatgccgacaaggga
aaagcttctcgggccgggactgacgctcctgatagcgacgacataagtcttgttgaccgg
gcacgtgcgatgaaaagtaaactactcaaggcgcaggaggaagctgcaaccatcctgcaa
tccgccaaaacctgcaaattaaaaggcaagggaaaagcacgtcaaatcgacaccacatct
gaagaggggagcgaaagtgaagataaaattgcacttactcgcccacgtacaaacggtcga
aggtcggctctcagccgctccaaactcttggaaagcgacgaggacccctcggagatagag
tcagaaatggtcaaagctgcaatcgagctatccaagaaagattccgttgccgccacctct
cgtccaaaggggtctagttcaacgaaggtagcatctacgaatagccgaagggttcgagca
gcgatcgacaaagaggatgacgaagactcggatttcgaagccgattctgatcacgagata
gactcaagcctttccacgctcgactccgactccgatagtagcgatgaaagtaatagccct
caaaaccgttctcacaagtcttctaaacctgcagtttctccgaaagctaaacgaccacga
acccgtcgcgtcaagatcccaaaacacctaacatggtgggagaaaaaccagatcaaactt
gagactcatcatccggaactagtcaacgtgtggggtgatctcagtgaaaaagtcaaagtg
gttgaaccttccaaagctgaacagcctgatggacttgagttgactctgctgccattccag
ctggaaggcctgtactggatgaaaaagcaagaagctgggccttggtctggcggcgtacta
gccgatgagatgggcatgggaaaaacaatccagacgattgccttgatcctctccgaccga
gttccaggtcatcgaaaacagactttggttatcgcacccacagtcgccatcatgcaatgg
cgtaacgagatagagaaattcgccaagggtctcaccgttaatgtttggcatggcggaaac
cgttcgagcgcccaggaagagatggaaagctttgatgtagttttaacttcatttgccgtt
ttggaatctgctttcagacgacagaattccggatatcgtcgcaagggacaaattctcaag
gaatcttctttactccaccaaatcgaatggcaccgtgtcattttggacgaagcccacaat
atcaaggatcgatcctgcaataccgccaaaggagctttcgaattgaaggcgaaatataga
tggtgcttgagtgggacaccactccaaaatcgagtcggtgaactttatagtttgatcaga
ttcttgggcgccgacccgttcagctactacttttgtaaactttgcgattgcaaaagttta
cattggagcttctcagaccgaaggtcttgtgatcaatgcaagcattcgcccatgcagcac
atttgcttctggaacaacgaaattttgaagccagttcaaaagtatggtgcctccgtggtc
ggcagtcacggacacacagcattcaacaagctgaaagtcttgcttgatcgaatgatgcta
cgacgaaccaagttggaaagagctgatgacttggggttgccacccagagccgttttggtt
agacgtgattactttaccgaagaagaggaagagctctattctagcttgtatagtgacgtc
acacgcaagtttagtacgtacgctgatgccggtacagttcttaacaactacgggaatatt
tttcagttgatcacccggatgcgacagatgtccaatcaccctgaccttgtccttaaatct
cgcgccgctcaggctgctttcaagaccattggcgatgccaacgcgccgaataccgacctt
aatcaattgacgtcaatacaaacatgccgcatatgtctcgatgaagcggaggatgcaata
atcagtcgatgtcgacacatattctgtcgtgaatgtattcggcaatatttagaaacggct
accgaacaggagccagaatgtccagtttgtcatttacccatcacgattgatctctcccag
gatgctctcgaagacgaaaacatgggctcaaaagccaggcaaggtgttcttgatcgatta
gatcctggcaagtggagaaccagcaccaaaatcgaggccttggtagaagaactgagcaaa
ctcaatcaatctgatcatacgatcaaatcgattgtattttcacagttcacagtcttttta
gatctaatcgagaggcgattacaattggcagggttcaagttagccagattgcaaggcaac
atgactccagaggcaaggaatcgaactatacaatacttcatgaacaacaacgatgttcaa
gtgtttctagtgtccctgaaagctggcggtgtcgcgctcaacctgactgaggcttctaga
gttttcatcatggatccttggtggaacccagccgttgagctccaagctatggacaggatt
catcgtttaggtcaacataggccggtggtggtcacgaggctaataattgaaaacagcatc
gagtcccgaattgttgaattacaaaagaagaaggaagccatgacaggagcggctttaggc
gatgatgaccaagctttgggtagattgacacccgaagatctctcattcttgttcacctta
tag
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