KEGG   Puccinia triticina (wheat leaf rust): PtA15_1A671
Entry
PtA15_1A671       CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K12852  116 kDa U5 small nuclear ribonucleoprotein component
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PtA15_1A671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptrc03041]
    PtA15_1A671
Spliceosome [BR:ptrc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    PtA15_1A671
 Complex C
   U5 SnRNP specific factors
    PtA15_1A671
SSDB
Motif
Pfam: GTP_EFTU EFTUD2 EFG_IV EFG_C GTP_EFTU_D2 MMR_HSR1 EFG_III SRPRB Roc
Other DBs
NCBI-GeneID: 77806618
NCBI-ProteinID: XP_053016886
LinkDB
Position
1A:join(5952131..5952152,5952219..5952338,5952435..5952497,5952580..5952724,5952804..5952942,5953014..5953223,5953304..5953765,5953835..5954292,5954360..5954821,5954898..5955205,5955273..5955391,5955466..5955562,5955645..5955867,5955954..5956020,5956095..5956157)
AA seq 985 aa
MNGGTSLDLSDESDRGSESNENDRHSPTVEPLAALPEPEDVNDMEVDHVGSSNAVVLHDD
KKYYPLASELYGPDVETMVEEEDAQPLTEPIINPIKVRKFTIVEKGEAVPETTFSKQFMA
DLMSHPESVRNVAVVGHLHHGKTALLDMLVHETHDFEWDTSKPLLYTDTHILEQQRGISL
KSSPMSFVLQNSKQKSFLVNMIDTPGHVNFLDEVTNSLRLVDGAILVVDAVEGVLVSTDK
IIRHLVQEGIPIVLVVNKVDRLILELRLPPADAYYKLKHTIEEVNTVISSCNPDPIHRVS
PELGNVGFASTEMGWCFNLTSFAKMYRDTFCTSKKDLFDITAFAKRLWGNVWYLPEQRKF
VKRNVGGECKRTFDHFILEPLYKLYGQVLGSEQGPLKETLADLGIYLKPSAYKLDVRPLL
RIVLSQFFGPSTGLVDMIASHVPNPQESAAAKLKSNYTGPLDSPLAQHIAKADPAGPLVI
QITKLYPTHDANEFRSFGRVLSGVARAGVKVKVLGEGYSVDDEEDMVEALIERVFIFESR
YSVETSGVPAGNLCLISGIDNSITKTATVVESAYTRPGGPGEGENLHIFKPISHLTKSVL
KIAVEPLNPSELPKLLEGLRKVNKTYPLVEIKVEESGEHVIIGTGEIYLDCCLFDLREIF
SEIEIKVSDPVVKFCETVVDTSVIKCYAETPNKKNKLTMIAEPLEKGIAEEIETGKINIR
MPAKTLSQHFMNNYQWDLLASRSIWAFGPEIDGGGTNILVNDTLPTEVDKKLLFSVKESI
KQGFQWATREGPICDEPIRNVKFKLLDATLADEPIYRGGGQIIPTARRVCYSSFMMATPR
LMEPVYYIEVQAPADCVPAVYLVLARRRGHVTQDIPKPGSPLYTVKAYIPVIDANGFETD
LRTHTQGQSFCMQTFDHWSIVPGDPTDKSITLRPLEPASAQALARDVALKTRRRKGLGDN
MSVAKYIEADLVAALIAAGQENLLG
NT seq 2958 nt   +upstreamnt  +downstreamnt
atgaatgggggaacttcattggacctttccgatgaatccgaccgaggtagcgaatccaat
gagaatgataggcactcacccactgtcgagccattggcagctttgcccgagccggaagat
gtcaacgacatggaagtggatcatgtaggttcaagtaatgcagttgtgctacacgacgac
aagaaatactatcctcttgcttcggaactgtatggccccgatgtcgaaaccatggttgag
gaagaagatgcgcagccccttaccgagccaatcatcaaccccatcaaagttcggaaattt
accattgttgaaaagggcgaagccgtacccgaaacgacgttctcgaagcaattcatggct
gatctcatgagccatcctgaatctgtccgcaacgttgctgtcgtaggccatctgcaccac
ggcaaaacagccctactggatatgctcgtccatgaaacacatgattttgaatgggataca
agtaaacctttgctctacacagatactcacattcttgaacaacagcgtggaatctcactc
aagtcctcgccgatgtcatttgtccttcaaaactccaaacaaaaatcatttttggtcaat
atgatcgatactcccggacacgtgaattttttggatgaagttacaaactctttacgtctg
gtagatggggcaattcttgtagttgatgccgttgaaggtgtccttgtaagcaccgacaag
ataatcagacatctagtgcaggaaggaattccaatcgttctcgttgtgaacaaggttgat
cggctgattttggaacttcggctccctcctgctgatgcttattacaaattgaaacacaca
attgaagaagtcaatactgtcatctcaagctgcaacccagaccctattcatcgagtctcg
cctgagctaggcaacgttggatttgcatccacggagatgggatggtgtttcaaccttacc
agctttgcaaagatgtatcgtgatacattctgcactagcaagaaggatttgtttgatatt
accgcctttgcaaaacgtctatggggcaacgtctggtatcttcctgagcagcggaaattc
gtcaagcgtaatgtgggtggggagtgcaagcggacatttgaccatttcatcttggagcca
ctttacaaactttacggacaagttttaggctcagaacaaggccctctgaaggagacactg
gcggatctcggaatttatctcaagccctctgcgtacaaactcgacgtccgaccgcttcta
agaatcgtactttcgcagtttttcggcccttccactggcttggttgacatgattgcatca
catgttccaaatccccaagagtcggccgctgccaagttaaagtcgaattacactggacct
ctcgactcaccccttgcacaacacatcgcaaaggctgaccctgctgggcccttggtaatc
caaataacgaagctttatccaactcacgatgccaatgaatttaggtcatttggtagggtt
cttagtggggtcgctcgtgccggtgtcaaggtcaaagttttaggtgaaggctactctgta
gatgacgaggaggacatggtggaggctctcattgaaagagtttttatctttgaatctaga
tattctgtggagacaagtggtgtgcctgcggggaatctttgcctgatctctggcattgat
aattcgattacaaaaacggccaccgttgttgagagcgcatatacccgtccaggcggtcca
ggcgaaggcgagaatcttcatattttcaaaccaatttctcacttaaccaagtcggtcctc
aaaattgcggtcgaacctctgaatccatccgagcttcccaagttgttggagggattacga
aaagtgaacaaaacttatcccttggtcgaaatcaaagtcgaagagtccggtgaacacgtc
atcattggaacgggtgaaatttatctggattgctgcttgtttgatctgagagaaatcttc
tccgaaatcgagattaaggtttcagacccagtggtcaagttttgtgaaactgttgtggat
acctcggtcattaaatgttatgctgaaacaccgaacaaaaagaacaaactcacgatgatt
gccgagcctctagagaaagggatcgcggaggaaatcgaaaccgggaagataaacatccga
atgcctgcgaaaaccctgagtcaacacttcatgaataactaccaatgggatcttctagca
tctcgatccatttgggcttttggccctgagatcgatggcggcggcaccaacattttggtc
aacgacacgctgccaaccgaagttgacaagaagcttttgtttagcgttaaggagagcatc
aaacagggtttccagtgggcaacccgggaagggcccatttgcgatgaaccaattcgaaat
gtgaaatttaagttgctggacgctactctggctgatgaaccgatctatcgtggtggcggt
cagattattccaactgcgcgacgggtttgctactcgtccttcatgatggcaaccccaaga
ttgatggagccagtttactacatcgaagtgcaagccccggcggattgtgttcctgcagtt
tatcttgttcttgcccgtcgaagaggacatgtcacccaagacatccccaagccaggctcc
cctctgtatactgtcaaagcctacattccagttatcgatgccaatgggtttgaaaccgat
ctgcgaactcacacgcaaggccaaagcttttgtatgcaaacatttgatcactggtcgatt
gttcctggagaccccacggacaagtcaatcactctccggccattggaacctgcatctgct
caagcccttgctcgcgatgtcgcactcaaaacaagacggcggaaagggctcggagataac
atgtcggttgccaaatatatcgaggcagatctggttgccgccttgattgccgcgggccaa
gagaacttgttgggatga

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