KEGG   Puccinia triticina (wheat leaf rust): PtA15_2A556
Entry
PtA15_2A556       CDS       T09180                                 
Name
(RefSeq) uncharacterized protein
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
ptrc  Puccinia triticina (wheat leaf rust)
Pathway
ptrc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ptrc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PtA15_2A556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ptrc03400]
    PtA15_2A556
Enzymes [BR:ptrc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     PtA15_2A556
DNA repair and recombination proteins [BR:ptrc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     PtA15_2A556
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N RNA_ligase
Other DBs
NCBI-GeneID: 77807482
NCBI-ProteinID: XP_053017794
LinkDB
Position
2A:join(5105012..5105253,5105347..5105530,5105608..5105698,5105777..5105871,5105938..5106142,5106203..5106279,5106347..5106444,5106514..5106615,5106696..5106896,5106979..5107121,5107192..5107347,5107425..5107502,5107591..5107674,5107738..5107805,5107893..5108018,5108084..5108209,5108293..5109924)
AA seq 1235 aa
MAKQQPTATQDITFSDFCTYLDKIASRKSKKAGARKQPAHDSSNQAAEDFEEWVNLHWPV
SRNTGKIIFRLLFPNQDVRRTYGLKEAKLGKYLGTLFSVQTGRGKRGEGLVAWNSTTEDQ
NGLETGRAGCLGLELEKILTEGGHNKYEVLKLSDVDQFLDELAAKSPWSNLGKGPARPPP
RPDTDILHNLYIPLSARQAAYMTQIILKDLRPLLYPIPSLSVYRSLTDYDSTAFKEISPY
CMMKAWHWAMPTIYRAKADFDVAADLCEQIPRDKTQLSTRTKELLRRFAKPKLGTCVNIP
KCVKASGPCLAAPLSKLTDQVWAETKMDGERMQIHIDTSKPKTEQIQIFSKSHRDSTSER
APTHDLIRATLGLHSKTTPESLGSLSRPKTHEQIKSGIFEAEMVAWNMDQGQVDEFWRIR
ELKKKPGQVDDNEIDNRPTTPSTDSQDDTNSQHLSDRASRHLALCFFDVLYLNGESLLES
PYNQRRRTLETCIHVIPHFSMLVDRKSFDMSRESGKEALRQHYARVIAERHEGLILKTAA
SVYNDSRSEHKWLKVKKDYIAGYGDTADYAIIGAAWDQNRGRELGVPTSTYTSWYIGMCD
NTLDIERTPGTRPHFRLIFTFLSYGFTRQQLERANRIAQDAGGETPDISEARQDWPFTFE
VARDLKKPAVIFKKPLVFELMGSGFTKRSRKHEYELRWPRITKMHDPGERDWTDAVDLET
HDEMAQRATDPKLLNIADLISGGSQQAAENGFQAEVDKWSEKLKTGDLNWRSRGRNLPSD
LSETSARVIAHKPAKFPHPNFDSPISKGKKSSKSDQQTEGTSRKSRVLSTPDDTAIVADV
EPTIRSKSSTSKEVQAGVQSSPQAELTLFSGIESIMTSLKRKASGSEIDKGTSAAPQMVL
DSEHGAESKTKRRKTSDQKPHPEVFPERATLVTAPKEKSALPKFASPKDTPTSRKRPIPR
KSLETPPAKRSSTLTRVQSSTSSITGSVAPEMRNYFANDLLDIEKEAMSSPLNPIKDPPA
GKTSIPNITSSANLTSGLIASSSISVQLNQPVTDPPPQDRSTTPPVQKSRPGPLASVTHG
IRDIEASTSASSGNPGLEIANAKSSAPPWHQKSDVQWCLVHDEQTYGIQGTKFGSVSQLL
QSLEINQKEFDHKPQTDSASYIFIENPTPESLCRVQKQVLFRSLSNPSIGVVGYDAKVLK
LPQSHRDAWKTFELFRFDPCVQELEDSGKPNEQKN
NT seq 3708 nt   +upstreamnt  +downstreamnt
atggccaagcaacaaccaaccgcaactcaggatatcacattttcagatttctgcacgtac
ctcgacaagattgcctccagaaagtccaagaaagccggagctcgcaagcaaccagcccat
gattcgtccaatcaggccgcggaagacttcgaggaatgggtcaatcttcattggccggtt
tccagaaacacaggaaaaatcatctttcgcttgctctttcccaatcaagacgtcaggcgc
acgtacgggcttaaagaggccaagctggggaaatatttgggcacccttttttcagtgcaa
accggtcgtggcaagagaggcgagggactggtcgcatggaattcgacgaccgaagatcaa
aacgggctcgagactggaagagccggctgcctgggattagaactcgaaaagattctcaca
gaagggggtcataataagtatgaagttttgaaactgtcggatgtggaccagtttcttgac
gaattagccgcaaaatccccttggtccaatcttggcaaaggtcctgctcgcccacctcca
agacctgacacggatatcctgcataatctctatatcccgttatccgcacgacaagctgcg
tatatgacccagatcattctgaaagacctgcgccctctactctatccaataccttctctt
tcggtgtatagatctctcacggattacgatagcacagccttcaaggaaatcagtccgtac
tgtatgatgaaagcctggcattgggctatgccaactatttaccgagccaaggcagatttc
gatgtggcggccgatttatgcgaacaaattccaagagataaaacgcagctttcaactcgc
acaaaggaactactccgaagatttgccaaacctaaactgggcacatgcgtcaatatcccc
aaatgcgtcaaagcttccgggccctgccttgcagccccgctatctaagttgacagatcaa
gtctgggctgaaacaaaaatggatggagagcgaatgcaaattcacattgatacatcgaag
ccaaaaacggagcaaattcagatctttagtaagagccatcgggatagtaccagtgaaaga
gcacctacgcatgacttgattcgagcaactcttgggcttcattcaaaaaccacaccagaa
tccttggggtcactttcgcgtccaaagacacacgaacaaatcaaatcaggtatatttgag
gccgagatggtcgcgtggaacatggatcagggtcaagttgacgaattttggcgaataagg
gagctgaaaaaaaaacctggacaagttgacgataacgaaattgacaaccgacccactact
ccgtccacggacagccaggacgacacgaatagccaacatctctctgaccgcgcatctcgt
caccttgcattatgtttttttgatgtactttacctgaatggtgaaagtcttcttgaaagt
ccatataaccagcgaaggcgtaccttggaaacgtgcattcatgtgattccacactttagc
atgctagtggataggaaatcgtttgacatgagtcgtgagtccggcaaggaagcactgcgc
caacattatgccagagtgatagccgagcgccatgaaggattaatcctcaagacagctgcg
tcggtatacaacgactctagaagtgaacacaagtggctcaaagtgaaaaaagactatata
gctggctatggagacacagccgattatgcaattattggagctgcctgggatcaaaacagg
ggacgggaactgggggtacccacttcaacatatacatcgtggtacatcgggatgtgtgac
aacactcttgacatcgaaagaacgcccggtacccgcccacatttccgcctgattttcacg
tttctttcgtatgggttcacacgtcagcaacttgaaagggctaaccgaatcgcccaagac
gccggtggcgagactcccgatatatctgaagcaaggcaggactggcctttcacctttgaa
gtggcccgggacttaaaaaagcctgccgtcatatttaaaaaaccccttgtctttgaatta
atgggctctggttttactaagcgctctagaaaacatgagtatgaactgagatggccccga
atcacaaagatgcacgacccgggggagcgagattggaccgacgctgttgatcttgaaaca
cacgacgagatggcccagagggcgaccgatcccaagctcttgaacattgccgacctcatc
tcgggtggcagtcagcaggcagcagaaaatggtttccaagctgaggtggacaagtggagt
gaaaagttaaagacgggtgatctgaattggcgttcaagaggtcgaaacttgccatccgac
ttgtctgagacctccgcccgagtcatcgctcacaagccagctaaatttcctcatccgaac
ttcgactcaccaatttctaaaggcaaaaaatcctccaaatccgatcagcaaacagaaggc
acctctcgcaaatctagagtcctcagcacacctgacgataccgcaattgtcgccgacgtt
gaaccaacaatccgctccaaatcgtcaacatcaaaagaggtccaagcgggcgttcaaagt
agtccacaagctgagctgacacttttcagtggcattgaatcgattatgacatctttaaag
cgaaaggcctctggatctgaaatagacaaaggcacttcagcggctccccagatggtgttg
gactccgaacatggcgcagaatcgaaaaccaagcgccggaagacttcggatcaaaagccc
catcctgaagtttttccagagagggctactctcgtgaccgcccccaaggaaaaatccgca
ctcccgaaattcgccagcccaaaggacacacccacctcccggaaacgtccaattcctagg
aaaagtttagaaacaccgcccgccaaaaggtcatctactctaacacgagtgcagtcgtca
actagttcaatcactggttcggtggcacccgagatgcgcaattactttgcgaatgattta
ctcgatattgaaaaagaggcaatgtcctcacctttgaaccctatcaaggacccgcccgca
ggcaaaaccagcatcccaaatataactagctccgccaacttaacttccgggctgatagcg
agctcttcgatctcagtacaacttaatcagccggttactgatccacctccgcaagaccga
tccactacgccgcccgttcaaaaaagcagacccgggccattagcctcagtaacacatggc
attcgagacattgaggcaagcaccagcgcaagtagcggaaatccaggcctcgagattgct
aatgcaaagagttctgcccctccttggcatcagaaatctgatgtacaatggtgcctagtc
catgatgagcagacctatggtatccagggtaccaaatttggttcggtgagccagctgtta
caatcattggaaatcaaccaaaaggagttcgaccacaaaccgcaaaccgattctgcaagc
tacatcttcatcgaaaatccaacaccagaaagcctgtgtcgggtccaaaaacaagtcctc
ttccgatcgctgtccaatcctagtataggtgtcgttggttatgatgctaaggttttgaaa
ctccctcaatctcatcgcgatgcttggaaaacattcgaattgttcaggtttgatccttgc
gttcaagagcttgaagatagtggcaaaccaaacgaacaaaagaactag

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