Pseudomonas tremae: I9H09_18845
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Entry
I9H09_18845 CDS
T08237
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ptre
Pseudomonas tremae
Pathway
ptre01501
beta-Lactam resistance
ptre01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ptre00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I9H09_18845
01503 Cationic antimicrobial peptide (CAMP) resistance
I9H09_18845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptre03036
]
I9H09_18845
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptre02000
]
I9H09_18845
01504 Antimicrobial resistance genes [BR:
ptre01504
]
I9H09_18845
Chromosome and associated proteins [BR:
ptre03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
I9H09_18845
Transporters [BR:
ptre02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
I9H09_18845
Antimicrobial resistance genes [BR:
ptre01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I9H09_18845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
HH_MFP_RND
Beta-barrel_RND_2
HH_EMRA
HH_CzcB
HH_YBHG
BSH_CusB
YknX_C
BSH_CzcB
Motif
Other DBs
NCBI-ProteinID:
UQB35585
LinkDB
All DBs
Position
4190902..4192062
Genome browser
AA seq
386 aa
AA seq
DB search
MQFKPAVTVLVTAVALATLLSGCSKKEQAAPPAQTPQVGVVTIKAQPYTLTTELPGRTTA
FRVAEVRPQVNGIILKRLFTEGGDVKAGQQLYQIDPAVYEANANSAKATLQSAKSMSDRY
KQLVSEQAVSRQEYDTALASTQEAQAALQTAQINLRYTKVLAPISGRIGRSAVTEGALVS
SAQTDAMATIQQLDPIYVDVVQSSSDMLKLRNDLDSGKLQKSGDNAAKVKLTLEDNSAYA
QEGKLEFSEVSVDQTTGSVTLRAVFPNPEHRLLPGMFVHAQLQAGVNSKAILAPQQGVTR
DLKGTPTAMVVNQDNKVELRTLVANRTVGSDWLIEDGLKEGDRVITEGLQYVKPGAEVKV
AEATNVKGANPAPAPATDKAAGSKGE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaagccagctgttaccgttctggtcactgccgtcgccctggcaacactgctc
agtggctgtagcaagaaggaacaggccgccccgcctgcgcaaacccctcaggtcggcgtc
gttaccatcaaagctcagccttacaccctgaccaccgaacttccgggcaggaccactgca
ttccgtgtagccgaggttcgtcctcaggtgaatggcatcattctgaagcgcctgttcacc
gagggcggcgacgtcaaggccggtcagcagctgtatcagatcgatccggcggtctatgag
gccaatgccaacagtgccaaggccaccttgcagtccgccaagtcgatgtctgatcgctac
aagcaactggtcagcgagcaagcggtcagtcgtcaggagtacgacaccgctctggcctcg
acccaggaagctcaggccgccctgcagaccgctcagatcaacctgcgctacaccaaggta
ctcgcgccgatttccggccggattggccgctctgccgtcaccgaaggtgctctggtgagc
agcgcccagactgacgcaatggcgaccattcagcagctcgatcccatctacgtggacgtg
gtgcagtcatcttccgacatgctcaagctgcgcaacgacctggacagcggcaaattgcag
aagtcaggcgacaacgccgccaaggtcaagttgaccctggaagacaacagcgcctacgcc
caggaaggcaagctggagttctccgaagtgtcggtagaccagaccaccggctccgtcacc
ttgcgtgccgtattcccgaacccggaacaccgcctgctgccaggcatgttcgttcacgcg
caactgcaggccggcgtcaattcgaaagccatcctggcccctcaacaaggtgtcacacgc
gacctcaaaggcacgccgaccgcgatggtggtcaaccaggacaacaaggttgaattgcgc
acgctagtagccaaccgcacggtgggcagcgactggctgatcgaagacggtctgaaagaa
ggtgatcgtgtcatcaccgaaggcctgcaatacgtcaaaccaggtgcagaagtgaaagtc
gccgaagcgaccaacgttaaaggagcaaacccggcgcctgccccggccactgataaagcc
gcaggcagcaaaggggagtaa
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