Paraburkholderia tropica: G5S35_12640
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Entry
G5S35_12640 CDS
T07044
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro00300
Lysine biosynthesis
ptro00550
Peptidoglycan biosynthesis
ptro01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G5S35_12640
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
G5S35_12640
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptro01011
]
G5S35_12640
Enzymes [BR:
ptro01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
G5S35_12640
Peptidoglycan biosynthesis and degradation proteins [BR:
ptro01011
]
Precursor biosynthesis
Amino acid ligase
G5S35_12640
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QNB12339
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All DBs
Position
A:complement(2807413..2808978)
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AA seq
521 aa
AA seq
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MSATRNQHPAHRQIADALAWLRARIAPAANLHADTRSLQPGDVFLAYAVEGADNRPHIES
ALARGAAAVVYQPEGYAGTFDFSQAQNALAVPQLDVVAGEIASGWYGDPSDAMLVVGVTG
TNGKTSCSQWIASALTAIGQKCAIVGTLGSGFVGQLVHTGFTTPDAPQLQRSLAQLQQSG
AKAVAMEVSSHALHQGRVNGTSFDIAVFTNLTQDHLDYHRTFEAYEAAKARLFAWPGLRA
AVINADDAAGRRLIAATRGTARTIAYGVETPAADAPAADAWLRATNVRATATGTAFHLET
SDWGEANVEVQTLGLFNVSNLLGVLGALLAANVPLLAALNEIAKLQPVNGRMERLGGRTD
HDEPLVVIDYAHTPDALEKTLDALRPIAAARGGQLICMFGCGGDRDATKRPLMGAIAERL
ADQVVVTSDNPRSESPTAIIDQIVGGMREAAKARRIEDRASAILQAVRGAAKEDVIVLAG
KGHEATQEIMGKKRAFSDQDHARLALAARPTSDRHGRGGGE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccacgcgcaatcagcatcccgcgcaccggcagatcgcggacgcgctcgcctgg
ctgcgcgcgcgcatcgcgcccgccgccaatctgcacgccgacacgcgttcgctccagccg
ggcgacgtgttcctcgcttacgccgtcgaaggcgcggacaaccgtccgcacatcgaaagc
gcgcttgcgcgcggcgcggcggcggtcgtctatcagccggaaggctatgcaggcacgttc
gacttctcgcaggcgcaaaacgcgctcgccgtgccgcagctcgacgtggtcgcgggcgag
atcgcgagcggctggtatggcgatccgagtgacgcgatgctcgtggtcggcgtgaccggc
acgaacggcaagacttcgtgcagccagtggatcgcttcggcgctcacggccatcggccag
aagtgcgcgatcgtcggcacgctcggcagcggctttgtcggccagctcgtgcacaccggt
ttcacgacgcccgacgcgccgcaactgcagcgctcgctcgcgcaattgcagcaatcgggt
gcgaaggcggtcgcgatggaagtgtcgtcgcacgcgttgcatcaggggcgcgtgaacggc
acgtccttcgacatcgccgtgttcacgaatctgacgcaggatcatctcgactatcaccgc
accttcgaggcgtatgaagccgcgaaggcgcgtctgttcgcgtggcctggtctgcgcgcg
gcggtcatcaacgccgacgacgcagcgggccgccgcctgatcgccgccacgcgcggcacg
gcgcgcacgatcgcgtacggcgtggaaacgcccgccgccgatgcgccggccgccgacgca
tggctgcgcgccacgaacgtgcgcgcgaccgccacgggcaccgcgttccatctggaaacg
tcggactggggcgaagcgaacgtcgaagtgcagacgctcggtctcttcaacgtcagcaat
ctgctcggcgtgctcggcgcgctgctggcggcgaacgtgccgcttctcgcggcgctcaac
gaaatcgcgaagctgcagccggtgaacggccgcatggagcgtctcggcggccgcaccgat
cacgacgagccgctcgtggtgatcgactacgcgcacacgcccgacgcgctcgaaaagacg
ctcgacgcgctgcgcccgatcgccgcggcgcgcggcggccagctgatctgcatgttcggc
tgcggcggcgaccgcgacgccaccaagcgtccgctgatgggcgcgatcgccgagcgtctc
gccgatcaggtcgtggtgacgagcgacaacccgcgcagcgaatcgcccacggcgatcatc
gaccagatcgtcggtggcatgcgcgaggccgcgaaggcgcgccgcatcgaggaccgcgcg
agcgcgatcctgcaggcggtgcgcggcgcggcgaaggaagacgtcatcgtgctggccggc
aaggggcacgaggcaactcaggaaatcatgggcaagaagcgcgcgttctccgaccaggac
cacgcgcgccttgcgctcgcagcccgaccgacttccgatcggcatgggcgcggaggcggt
gaatga
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