Paraburkholderia tropica: G5S35_20780
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Entry
G5S35_20780 CDS
T07044
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
ptro
Paraburkholderia tropica
Pathway
ptro00909
Sesquiterpenoid and triterpenoid biosynthesis
ptro01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ptro00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
G5S35_20780 (shc)
Enzymes [BR:
ptro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
G5S35_20780 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
G5S35_20780 (shc)
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GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Pec_lyase
TED_complement
Motif
Other DBs
NCBI-ProteinID:
QNB14000
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Position
B:complement(1347909..1349951)
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AA seq
680 aa
AA seq
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MNDLSQAMPTDETARVLSAAALAPTLAPALDDGAAALPAGTLDAAVARATDAILADQRAD
GHWVYELEADATIPAEYVLLVHYLGEEANLELEQKIARYLRRIQLPGGGWPLFTDGDMDV
SATIKAYFALKMIGDAEDAEHMVRARDAILAAGGAEKANVFTRILLALFGVVTWYAVPMM
PVEITLLPKWFPFHLSKVSYWARTVIVPLLVLGAKRPVAKNPRGVRIDELFLSAPVTTGL
NERAPHQSKGWFGFFRAVDGVLRVTDPLFPTYLRQRAIDAAVAFVDERLNGEDGLGAIFP
AMANAVMMYDVLGYPADHPHRAIARQSVEKLVTVHTDEAYVQPCLSPVWDTSLAAHALLE
TGDARAEEGARRGLEWLRPLQILDVRGDWISRRPDVRPGGWAFQYANPHYPDVDDTAVVV
AAMDRVDKLDKTQSYAEVMSRAREWVVGMQSSNGGWGAFEPENTHEYLNNIPFSDHGALL
DPPTADVSGRCLSMLAQMGEMPVASEPARRAYNYILDEQEADGSWYGRWGMNYIYGTWTA
LCALNAAGLEHADPRMKRAAQWLISIQNEDGGWGEDGTSYKLEYRGYERATSTASQTAWA
LLGLMAAGEVNHPSVARGIAWLRQTQQDHGLWDETRFTATGFPRVFYLRYHGYRKFFPLW
ALARYRNLKRDGATRVTVGL
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacttatcccaagccatgccgaccgacgagacggcgcgcgtcctgagcgccgcc
gcgctggcgcccacgctcgcgcccgcgctcgacgacggcgccgccgcgctgccggccgga
accctcgacgccgccgttgcgcgcgcgaccgatgcgatcctcgccgatcagcgcgccgac
ggccactgggtctacgaactcgaagccgacgccacgattcccgccgaatacgtgctgctc
gtccactacctgggcgaggaagcgaacctcgagctcgaacagaagatcgcgcgctacctg
cgccgcatccagctgccgggcggcggctggccgctgttcaccgacggcgacatggacgtg
agcgcgaccatcaaggcgtatttcgcactcaagatgatcggcgacgccgaagacgccgag
cacatggtgcgcgcgcgcgacgcgattctcgcggccggcggcgcggaaaaagccaacgtg
ttcacgcgcatcctgctcgcgctgttcggcgtggtcacgtggtacgccgtgccgatgatg
ccggtggaaatcacgctgttgccgaagtggttcccgttccatctctcgaaggtctcgtac
tgggcgcgcacggtgatcgtgccgctgctcgtgctcggcgcgaagcgtccggtcgcgaag
aatccgcgcggcgtgcgcatcgacgaactgttcctgagcgcgcccgtcaccaccggtctg
aacgagcgcgcgccgcatcagagcaagggctggttcggcttcttccgcgccgtggacggc
gtgctgcgcgtgaccgatccgctgttcccgacgtatctgcgccagcgcgcgatcgacgcg
gcggtggccttcgtcgacgaacgcctgaacggcgaagacggcctcggcgcgatcttcccg
gcgatggccaacgccgtcatgatgtacgacgtgcttggctatccggccgatcatccgcat
cgcgcgattgcccgccagtcggtcgaaaagcttgtcacggtgcataccgacgaagcctac
gtgcagccgtgtctgtcgcccgtgtgggacacctcgctggcagcgcacgcgctgctcgaa
accggcgacgcgcgtgccgaagaaggcgcacggcgcggccttgaatggctgcgtccgctg
cagattctcgacgtgcgcggcgactggatctcgcgtcgtcccgacgtgcgtccgggcggc
tgggcgttccagtacgcgaatccgcactaccccgacgtcgacgacacggctgtggtcgtg
gccgcgatggatcgcgtcgacaagctcgacaagacccagtcctacgccgaggtgatgtcg
cgcgcgcgcgagtgggtggtcggcatgcagagcagcaacggcggctggggcgcgttcgag
ccggaaaacacgcacgaatatctgaacaacatcccgttctcggaccacggcgcgctgctc
gatccgccgaccgccgacgtctcgggccgctgtctgtcgatgctcgcgcagatgggcgaa
atgccggtggcgagcgagccggcgcgccgcgcgtacaactacatcctcgacgagcaggaa
gcggatggcagctggtacggccgctggggcatgaactacatctacggcacgtggacggcg
ctgtgcgcgctgaacgcggccggtctcgaacacgccgatccgcgcatgaaacgcgcggct
cagtggctgatctcgatccagaacgaggacggcggctggggcgaggacggcaccagctac
aagctcgaataccgcggctacgagcgcgcgacgagcacggcgtcgcagacggcctgggcg
ctgctcggcctgatggcggcgggcgaagtgaatcatccgtcggtcgcgcgcggcatcgcg
tggctgcggcagacgcagcaggaccacggcctctgggacgaaacgcgcttcaccgcgacc
ggcttcccgcgcgtgttctatctgcgctaccacggctatcgcaagttcttcccgctgtgg
gcgctcgcgcgctaccgcaacctcaaacgcgacggcgcgacgcgcgtcacggtcggtctg
tga
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