Polynucleobacter tropicus: DCO17_07785
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Entry
DCO17_07785 CDS
T08318
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ptrp
Polynucleobacter tropicus
Pathway
ptrp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DCO17_07785 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrp03400
]
DCO17_07785 (nth)
Enzymes [BR:
ptrp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DCO17_07785 (nth)
DNA repair and recombination proteins [BR:
ptrp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DCO17_07785 (nth)
Prokaryotic type
DCO17_07785 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QKM65729
UniProt:
A0A6M9PY93
LinkDB
All DBs
Position
1525528..1526184
Genome browser
AA seq
218 aa
AA seq
DB search
MNPEKRRAFFEQLKANNPTPTTELEYNSPFELLIAVLLSAQATDVSVNKGTRKLFKIANT
PQALLDLGEEGVRPYIQHIGLFNSKGRHIQETCRLLIEKHGGEVPQNREDLEALPGVGRK
TANVILNTAFGQPTIAVDTHIFRVSNRTGLAPGKDVLEVEKQLLKRVPKEYLLDAHHWLI
LHGRYTCKARNPDCAQCIVEPLCGFKEKTAKGKVRGTI
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagaaaagcggcgtgcttttttcgagcaactaaaagcaaacaatccaacgcct
actaccgaactggaatataactcaccttttgagttgctgattgccgtattgctatccgct
caagcgacagatgtgtcagtaaataagggcactcgaaaactgtttaagatcgccaatacc
cctcaagcacttctagatctgggcgaagaaggtgtacgtccttacattcaacatattggg
ctttttaattccaaaggtagacacatccaagaaacctgtcgcttactcattgaaaaacat
ggtggggaagtaccgcaaaacagagaagatcttgaggctttaccaggcgttggtagaaaa
acagcaaatgttattttaaataccgcttttggccaacccacaatagcggtagatacacat
atctttcgcgtatccaatcgtactggtttggcgccgggcaaagacgttctggaagtagag
aaacaattactcaagcgagttccaaaagagtatcttctagatgcgcatcactggttaatc
ttgcatggtagatatacttgcaaagctcgcaaccctgactgtgcacaatgcattgttgag
ccactatgtggatttaaagaaaaaactgctaaaggaaaagttcgtggcactatttaa
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