Pyrenophora tritici-repentis: 6339431
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Entry
6339431 CDS
T10215
Symbol
PtrM4_016500
Name
(RefSeq) HepA, Superfamily II DNA-RNA helicase, SNF2 family
KO
K15083
DNA repair protein RAD16
Organism
ptrr Pyrenophora tritici-repentis
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptrr03400
]
6339431 (PtrM4_016500)
DNA repair and recombination proteins [BR:
ptrr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
6339431 (PtrM4_016500)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
zf-C3HC4
DEAD
AAA_34
zf-RING_UBOX
DRAT
Motif
Other DBs
NCBI-GeneID:
6339431
NCBI-ProteinID:
XP_001931585
LinkDB
All DBs
Position
1:<4194388..>4197603
Genome browser
AA seq
1030 aa
AA seq
DB search
MPPRRSNRKSTVSVVNDVAPAPSPSRAATLVDSTTTDSRHRQQRTRSTRSFVPNSSDQEE
ESHDIEEPEEQTHVRRVLKEVSIPVMKSKKAPQAGGRLARLNAQQAEQESSTDSPSLENS
DAETPGTSIATTPAASVSRGKRSTRKGKKAPTPSQSTSSGLKRSRNAVPDSESEDIALDM
DAEIALQMQLEDEMDVVSHKRRKIKDEEDIDMLSEDEPLIKSTRKRVPSYTGKGKGKAKA
EDLHGEADSLLDELSSPPPYKGKGKGKAEEVSSKRRRSVRSSAKKVGKFTEDDMLDDDES
DGGEFHLESDDESVNDVDSAPPTDCEDSDLPLAMSSRLKKLVAENPTKVARKKKLTAKDK
TEANRRRARFAHIADKWERKRAMNRERAEQQHPKLITMWDDLQKIPVLEVQKAEQPKSIN
RRLKPFQLEGLSWMIRQEQTHYKGGLLGDEMGMGKTIQAVSLIMSDYPAKQPTLVCVPPV
ALMQWSNEIREYTDNKLKVLVYHGTNAKCKKMTVKELKSYDVIMVSYNSLESLHRKETKG
WSRGEDIIKEASPLHAIHYHRLILDEAHSIKSRNTGVAKACFALTSNYKWCLSGTPVQNR
IGEFFSLLRFLEVRPFADYFCRSCDCEKLHWATDDDHMCVACNHGASEHISVFNQELLNP
ITGDDVQLREEALTKLHLITARIMLRRMKRDHTSSMELPMKDIIIHNEFFSEVERDFSTS
IMSNSARKFDTYVAQGVMLNNYANIFGLIMQMRQVANHPDLLLKKNAVEGAGNVYVCNIC
DEPAEDAVRSHCRHEFCRACIKDLMDTCEASGTEADCPRCHIALSIDFEQPELEQDEDSV
KKTSIINRIKMENWTSSTKIEMLVYDLYKLRSKKQTLKSIVFSQFTSMLQLIEWRLRRAG
FNTVMLDGSMTPAQRQKSIDHFMTNPDVEVFLVSLKAGGVALNLTEASRVFIVDPWWNPA
AEWQSADRCHRIGQRRPCVITRLCVEDSVESRMVALQEKKAAMIAGTINNDKVAMDRLSP
EDLQFLFRGT
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaggcgatcaaaccgcaagtcgacggtcagcgttgtcaacgacgtcgcccct
gcaccttcgccttcgcgcgcagcaacattggtagattctacaaccaccgacagtcgccac
aggcaacagcgcactcgctccactcgttcttttgtacctaattcttccgatcaagaggaa
gaatcgcacgacattgaggagcccgaagaacaaacccacgttcgccgtgttctcaaggag
gtttcaatccccgtcatgaagtctaagaaggcgcctcaagcaggcggacgtctcgcaagg
cttaacgcacaacaagctgaacaggagagctcgactgactcaccttctttggagaattca
gacgctgagacaccgggaacaagcattgcgacaacgccagcggcctctgtcagtcgtggc
aagaggtctacgcgcaaggggaagaaagctcctacgccctcgcaaagcacctcttccggc
ctcaaaagatcgcgcaatgccgtaccagattcagaatcggaagatatagccctcgacatg
gacgccgaaatcgccctacaaatgcagctggaggacgaaatggacgtggtatcacacaag
cgccgcaagatcaaggacgaagaggacatcgacatgctctctgaggatgagccgttgata
aagtcgacgcggaagagagtgccttcgtataccggcaagggcaagggaaaagccaaggct
gaagaccttcacggcgaggcagattcattgttggacgagctgagttcgccaccaccatac
aaaggcaagggcaaaggcaaggctgaagaggtctcgagcaagcgccgtcgctctgttcgc
tccagtgctaagaaggtgggcaagttcacagaagacgacatgttggatgatgacgagtct
gatggcggtgaattccatcttgaatctgacgacgagtcggtaaacgatgttgattcggcg
ccacccaccgattgtgaggacagcgacctacctcttgcgatgagttcacgccttaagaag
cttgttgcagagaatccaacaaaggtcgctcgtaagaagaagcttacagctaaagacaag
accgaagcaaaccgccggcgggctagattcgcacacattgcggataagtgggagcgcaag
cgtgccatgaaccgtgagcgagcagagcagcagcacccaaagctgatcaccatgtgggat
gacctgcaaaagattccagttctcgaagtccaaaaggccgagcaaccaaagtccatcaac
cgccgactcaaaccttttcagcttgaggggcttagttggatgatacgccaagaacagact
cactacaaaggcggtctgcttggagatgagatgggcatgggaaaaactatccaggctgtc
tctttgatcatgtctgattaccctgcgaagcaacctacactagtctgcgttcctccagtc
gctctcatgcagtggtcgaacgagattcgcgagtacaccgacaacaagctcaaggttctc
gtgtatcatggcacgaatgcaaaatgcaagaagatgacagtgaaggagctgaagtcgtat
gacgtcatcatggtttcctacaactccttggagtcattgcaccgcaaagagaccaaggga
tggtcccgtggagaggatataatcaaagaagcatcgccactccatgctatccactaccac
cgtcttatcttggacgaagcgcacagcatcaagtctcgcaacacgggtgtagcgaaagcc
tgctttgcgctgactagtaactacaagtggtgtctgtctggaacgccagttcagaatcgt
attggagagttcttttcgcttctccgtttcctagaagtccgtccgtttgcagactacttc
tgccgctcctgcgattgcgagaaactgcactgggctactgatgacgatcacatgtgcgtt
gcttgcaaccacggtgcatctgagcacatttcggtgttcaatcaggagctgctaaacccc
atcacaggagatgatgtccagcttcgtgaggaagccttgacaaagcttcatctgatcacc
gctcgcatcatgttgcgacgcatgaagcgtgaccacacaagctcgatggagctgccgatg
aaggacattattattcataatgagttcttcagcgaggtggagcgcgacttctcgacttcc
atcatgtccaactcggctcgcaagtttgatacgtatgttgctcagggtgtcatgctcaac
aactacgccaacatcttcggtctgattatgcagatgcgtcaggttgctaatcaccctgat
ctgctgctgaagaagaacgctgttgaaggtgcaggcaatgtctacgtgtgcaacatttgt
gatgagcctgccgaggatgcagtccgttctcactgtcgtcacgaattctgccgtgcttgc
atcaaagacttgatggatacgtgtgaggcttccggaaccgaggccgactgtccccgctgt
catatcgctctgtcaatcgactttgagcagccggagcttgagcaagatgaggactctgtc
aagaagacctcgatcatcaaccgcatcaagatggagaactggacttcctctacgaagatt
gagatgctcgtctatgatctctataagctgcgcagcaagaagcagacgctcaagtcgatt
gtgttcagtcagttcacatcaatgttgcagctcattgagtggcgtctccgtcgcgcaggt
ttcaacacagtcatgttggatggaagcatgacgcctgctcaacgccaaaagagcattgac
cacttcatgacgaacccggatgttgaggtcttcctcgtttcgctcaaggctggtggtgtc
gctctcaacttgacggaagcgtcgagagtgttcattgtcgatccatggtggaacccagct
gctgagtggcaatctgccgatcgttgccatcgtatcggtcagcgacgcccttgtgtcatc
acgcgtctctgcgttgaagacagtgtagagtcgcgcatggtagcgctgcaagagaagaag
gcagctatgattgctggtactatcaacaacgacaaggttgccatggatcgcttgagtcca
gaggacctgcagttcttgttccgcggtacttag
DBGET
integrated database retrieval system
