Pyrenophora tritici-repentis: 6346234
Help
Entry
6346234 CDS
T10215
Symbol
PtrM4_136790
Name
(RefSeq) FusA, Translation elongation factors (GTPase)
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ptrr Pyrenophora tritici-repentis
Pathway
ptrr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptrr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
6346234 (PtrM4_136790)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptrr03041
]
6346234 (PtrM4_136790)
Spliceosome [BR:
ptrr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
6346234 (PtrM4_136790)
Complex C
U5 SnRNP specific factors
6346234 (PtrM4_136790)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
MMR_HSR1
EFL1
Ras
DUF5505
Motif
Other DBs
NCBI-GeneID:
6346234
NCBI-ProteinID:
XP_001938291
UniProt:
B2WDA0
LinkDB
All DBs
Position
8:605087..608180
Genome browser
AA seq
995 aa
AA seq
DB search
MDDLYDEFGNFIGEAESDEDVQSTGEAADAYVLDDEEEAEAEANDQQLMEVDEGPSNAVV
LHEDKQYYPSASDVYGHDVEVLVQEEDMQSLAQPIIAPVVQRKFTIQETDLPPVHHSREL
LTDLMNFPDQIRNIAIAGHLHHGKTAFMDMLVLETHDIQDRLDYKKGKKREEQLRYTDVH
VLERERGLSIKAAPMSLVLQNTKLKSHLFNILDTPGHVNFADEVAASLRLVDGVVLVVDV
VEGVQVNTEQIIKHAVLEDLPITLVVNKMDRLILELKLPPSDAYFKIKHVIEEVNTVIEN
TIPGRGESRRVSPEKGNVAFACSSMRWCFTIQSFAKMYSDFYPGPSKLPGFGVPMKGLDI
EKFAMRLWGDIFYNPGSRKFSRKRQEEGSQRSFVHWILEPVYKIYSHTLSQSPDELKDTL
EALGIRLKPSEYKTDAKELMRLVCQQYFGPSLGFVDMITQHIPSPEEGAKRLLERHYTGP
LDTKTAEAMQKCDQNGPLVVHVTKLFNATDAKSFTALGRVLSGTATSPQSVRVLGEGYTI
EDEEDMVIATVTDTWIAQSRYNIPVSGVPAGNWVLLGGVDNSIVKTATIVATKLPEDEDA
YIFRPIRHFFESVFKVAVEPINPSELPKMLDGLRKINKSYPLITTKVEESGEHVVLGTGE
LYMDCVLHDLRRLYADMEIKVSDPVTRFCETVVEMSAIKCYALTPNKKNKITMIAEPLDP
GIAEDIEAGKVNIKDPVRVVAKFFEENYGYDMLASRNIWAFGPDDMGPNILQNDTLPAEV
DGKTLRTVRDTLRQGFSWATREGPLCEEPIRNTKFRITDVELASEAIFRGGGQIIPTSRR
ACYSSFLMASPRLMEPVYSCSMVGPSDTKSSLYTVLARRRGHVLQDGPIAGTPLYNVRGL
IPVIDSFGFETDLRIHTQGQVSLSLVFDRWSIVPGDPLDKEVTTRPLEPATAQQLARDFV
LKTRRRKGLAEDVTISKFLEPELFRSLKESGVLDG
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctctacgacgagtttggtaacttcattggcgaagcagagtcggatgaagat
gtccagagtaccggcgaggcagccgacgcctatgtcctcgacgatgaggaagaggccgag
gccgaggccaacgaccagcagcttatggaggtagatgaagggccgtcgaatgctgtagtc
cttcatgaggacaagcaatactacccctccgcatctgacgtatacggtcatgatgtcgag
gtgctggtacaagaggaagatatgcaatcgctggcgcagcccattattgcaccagtagtc
cagaggaagttcacaatccaggagacagatctgccgcccgtacaccactcgagggagctt
ctgaccgatctcatgaattttcccgaccagatacggaacattgccattgctggacatttg
catcatggaaaaacggcattcatggacatgctggtcttggagacgcacgatatccaggat
cgtctggattacaagaaggggaagaagcgggaggaacagctgcgctacacagacgtacac
gtgctcgaacgcgaacgaggcctttccatcaaggctgccccgatgagcttggtgctccag
aacacgaagctaaagtcgcatcttttcaatatcctcgacacacccggacatgtgaacttc
gcggatgaagtagcggcatcgttgcgcttggtagacggagtagtactcgttgtggacgtg
gtcgagggcgtacaggtcaacacagagcagattatcaagcatgcggtgctggaagatctt
cccatcacactcgtagtgaacaagatggaccgcttgattctggagctaaagctaccaccc
agcgacgcatacttcaagatcaagcacgtaatcgaggaggtcaacactgtcatcgagaac
actattccaggccgcggcgagagcagacgagtaagccctgaaaaaggcaacgtcgcattc
gcctgctccagcatgcgatggtgttttacgatccagtcattcgctaagatgtactccgat
ttctatcccggtccctcgaagcttccaggattcggtgttccgatgaagggcttggatatc
gagaaattcgctatgcgactctggggtgacattttctacaacccaggaagccggaagttc
agtcgcaagcgtcaggaggaaggctcacaacgatcttttgtacactggattttggagccc
gtctacaagatctactcgcatactctcagtcagagtccagatgagctcaaggacacgctc
gaggctttgggcatacgactgaagccttctgaatacaagactgacgcaaaggagctaatg
cgtctagtatgccaacagtattttggaccctccctaggattcgtagacatgatcacacag
catattccatcaccagaagagggtgcgaaacgactgctggaaagacactacactggacct
ttggatacaaagaccgcagaggcgatgcagaagtgcgatcagaacggaccattggttgtg
catgtaacgaagctcttcaacgcaacagacgcaaagtcctttactgccctaggccgagta
ctgagtggtacagcgacttcgccccaatcggtgcgtgtactaggagaaggctatacgatt
gaggatgaggaagacatggttattgcgactgtaacggatacatggatagcccagtcgaga
tataacattcccgttagcggtgttccggcaggtaactgggtgctcctaggcggcgtcgat
aactcgatagtcaagacggcgacaattgtagctaccaagctcccagaagacgaagatgcc
tacatattccgacccatccgacactttttcgaatccgtcttcaaagtcgcggtcgagcca
attaatccctccgaactacccaaaatgcttgacggtcttcgcaagatcaacaagtcatac
ccgctcatcacaactaaagtggaggagtcaggagagcacgttgttcttggtactggagag
ctgtacatggactgcgttctgcatgacctccgacggttatacgcagacatggagatcaag
gtttcagacccggtcacccggttctgcgagactgtcgttgagatgtctgccatcaagtgc
tatgctcttacgcctaacaagaagaacaagatcaccatgattgcggagccgctagatcct
ggaattgcagaagatatcgaggctggcaaggtgaacatcaaagaccctgtgcgtgtagtg
gccaagttcttcgaagagaactacggatatgatatgctcgcatcgcgcaacatctgggca
tttggaccggacgatatgggcccgaatatcctacaaaacgacacacttcctgcggaagtt
gatggcaagaccctcagaacggtgcgagatacgcttcgacagggtttcagctgggctact
cgagagggtccgctttgcgaagagcccattcgcaacaccaagttccgtatcacagatgtc
gaactggcatcagaagcaatcttccgcggaggtggtcagattatccccacgagtcgtcga
gcctgctattcaagtttcttgatggcgagtcctaggctgatggagccggtatactcttgc
agtatggtcggtccttcggacaccaagagtagtctatacactgtgcttgcacgaaggaga
ggtcatgttctgcaagacggtcccatcgcaggcacaccactttacaatgtgcgtggtctt
attccggtcattgattccttcggtttcgagaccgatcttaggattcatacacaaggccaa
gtctccctctccctcgtctttgatcgttggtccatcgtccccggcgaccctctcgataaa
gaggtgacaacccgaccgctcgaacccgcaaccgcacaacagttggcacgcgactttgtc
ctcaagactcgcaggaggaagggtctcgcggaggatgttaccatcagcaagttcctagaa
cctgagctgttccgtagtttaaaggaaagtggggtgttggatggttag
DBGET
integrated database retrieval system
