Paenibacillus tundrae: V6W81_20280
Help
Entry
V6W81_20280 CDS
T11276
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ptun Paenibacillus tundrae
Pathway
ptun00300
Lysine biosynthesis
ptun00550
Peptidoglycan biosynthesis
ptun01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptun00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V6W81_20280
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6W81_20280
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptun01011
]
V6W81_20280
Enzymes [BR:
ptun01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
V6W81_20280
Peptidoglycan biosynthesis and degradation proteins [BR:
ptun01011
]
Precursor biosynthesis
Amino acid ligase
V6W81_20280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WWM59867
LinkDB
All DBs
Position
complement(4511842..4513329)
Genome browser
AA seq
495 aa
AA seq
DB search
MLLKQLASKLITARLNGEPNTECLNLQTDSRQVQPGDLFICLPGHTVDGHEYAEKAVQAG
AVALVVERLLDLPVPQLLVRDSRVAMAVLADFFFDSPSQKMNMIGVTGTNGKTTTTYLIE
KIMSDYGQNTGLIGTIQMRYAGRTYPMSGTTPEALDLQRSLNDMVQSGTQCCVMEVSSHA
LEQGRVKGTEFRTAVFTNLTQDHLDYHHSMEEYRAAKGLFFARLGNGYAEEASKRKFAVI
NADDPAAAYFISVTAAEVITYGMGDNADVRASQISITSQGTAFHVDTFAGSTDISLRMVG
KFNVYNAMAAIAAALIEGIPLEEIKRSLETVPGVDGRVEAVDEGQPFAVIVDYAHTPDGL
ENVLRTVKEFAEGRVICVFGCGGDRDRTKRPLMGKIAAKYSDIVLVTSDNPRTEDPDLIL
KDIEQGLIEESVPADRYVMIVDRRQAIHEAIEMASPADVVLIAGKGHETYQIIGTTKTDF
DDRIVAKEAIRGKSN
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgctcttaaaacaacttgcatcaaaacttataactgctcgtctgaatggtgaacccaat
acagagtgcttaaacttgcagacagattctcgtcaggtacaaccgggagatctgtttatc
tgtcttccgggacataccgtggatgggcatgaatatgcagagaaagctgtacaggcagga
gctgtagctctagttgtggaacgtctactcgatctacccgtgccacagcttcttgtgaga
gatagccgagtagcgatggctgtgcttgctgatttcttttttgactcaccaagtcaaaag
atgaatatgattggagtaacaggaacgaatggtaaaacaacgaccacgtacttgatcgaa
aaaatcatgagcgactatgggcaaaatacaggtttgatcggtacgatccaaatgcgttat
gccggccgtacttatccaatgtcaggcacaacacctgaagcacttgatttgcagcggagt
ttgaatgatatggtacaatcgggtacgcagtgctgcgtcatggaggtttcttctcatgct
cttgaacagggtcgtgtaaaaggaacggaattccgcacagcggtgtttaccaatttgaca
caggatcatctagattaccatcattccatggaagaatatcgcgcagcgaaagggttgttc
tttgcccgcctaggcaatggttatgccgaagaagcttccaaacggaaatttgcggtcatt
aacgcggatgatccggcagcggcttatttcatttctgttacggcggctgaagtgattaca
tatggtatgggcgacaatgcagacgtacgtgcatcccaaatttcgattacttctcagggt
acagcattccatgtggatacatttgcaggcagcacggacatttcgctacgtatggttggt
aaattcaatgtgtataatgccatggctgcaattgctgcagcactcattgagggcattcct
cttgaagaaatcaaacgtagcctggagactgtgccaggggtagatggacgtgtagaggca
gttgatgagggacaaccgtttgcagtcattgtagactacgcacatacaccggatggactg
gagaatgtattaagaaccgtcaaagaatttgctgaaggacgtgtaatctgcgtatttggc
tgtggtggcgaccgggaccgtacgaaacggccgttgatgggtaaaattgctgctaaatac
agcgacatcgttttggtcacttctgataatccacggacagaagatcctgacctgattctt
aaagacattgagcaagggctgattgaggaatccgttcctgcggatcgctatgttatgatt
gttgatcgacgtcaggctattcatgaggctattgaaatggcaagcccagccgatgtagta
ttgattgcgggcaagggacatgaaacctatcagattatcggcacaaccaaaaccgacttt
gatgatcgaatcgtagccaaagaagcgataaggggcaaatccaattga
DBGET
integrated database retrieval system
