Pseudomonas trivialis: AA957_21885 Help Entry AA957_21885       CDS       T04006                                  Name (GenBank) NAD-dependent DNA ligase LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ptv  Pseudomonas trivialis Pathway ptv03030   DNA replication ptv03410   Base excision repair ptv03420   Nucleotide excision repair ptv03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ptv00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     AA957_21885    03410 Base excision repair     AA957_21885    03420 Nucleotide excision repair     AA957_21885    03430 Mismatch repair     AA957_21885  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ptv03032]     AA957_21885    03400 DNA repair and recombination proteins [BR:ptv03400]     AA957_21885 Enzymes [BR:ptv01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      AA957_21885 DNA replication proteins [BR:ptv03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      AA957_21885 DNA repair and recombination proteins [BR:ptv03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      AA957_21885    NER (nucleotide excision repair)     GGR (global genome repair) factors      AA957_21885    MMR (mismatch excision repair)     DNA ligase      AA957_21885   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       AA957_21885 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 HHH_5 BRCT Nlig-Ia DNA_ligase_ZBD 5_3_exonuc PTCB-BRCT Tla3_C DUF4796_N Motif Other DBs NCBI-ProteinID:  AKS08663 UniProt:  A0A0H5AEZ7 LinkDB All DBs Position 4830902..4833259 Genome browser AA seq 785 aa AA seqDB search MTAAHTRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFHELKALEAEHPELITRDSPTQ RVGSAALSAFTQVKHEIPMLSLGNAFDETTMLEFDRRVTEGLDLPAGDLFGGGAAVEYSC EPKLDGLAVSLLYRDGELVRGATRGDGTTGEDISVNVRTVRNIPLKLHGSGWPATLEVRG EVFMSKAGFERLNASQLEVGGKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGVTTDIS DTHIGNLQQLKKWGMPISHELKLAKGIQDCLEYYRDIGERRNSLPYEIDGVVFKVNSIAS QRELGFRAREPRWAIAHKFPALEELTELLDVEFQVGRTGAVTPVARLKPVKVAGVTVSNA TLHNMDEVARLGVMIGDTVIIRRAGDVIPQVVSVVLERRPATARAVPIPERCPVCGSHVE RTQLVKRSKGKETVSEGAVYRCVGRLACGAQLKQAIIHFVSRRAMDIDGLGDKTIEQLVD EKLIGSPADLYKLKYEQIIDLEGFADISSKKLITAIENSKTPTLARFIYALGIPDVGEET AKVLARSLASLERVQQALPEVLTYLPDVGLEVAHEIHSFFEDSHNQDVIGALLSPDECGL QLQEQGDLSAEFAASTTLGGLLDKLHVPSVGPGAAQKLADKFGSLDGVIKADWLDMRQAL PEKQAKAVREFFDNADNANHALAIEQQLKDFGMHWLSEKKVVEGLPEAGHTWVLTGSLEL MSRDVAKEKLESLGAKVAGSVSAKTHCVVAGPGAGSKLAKASELGLKVLDEEAFVAFLAK HNITV NT seq 2358 nt NT seq  +upstreamnt  +downstreamnt atgaccgccgcccatacccgcatcctcgaactgcgcgctgaactggatcagcacaactac cgttaccacgtcctcgacgagccaagcattccggacgccgagtacgaccggttgttccat gagctcaaggccctggaggccgagcatccggagctgattacgcgggattcaccgacgcag cgggtcggcagtgcggcgctgtcggcgttcacgcaggtgaagcacgagattccgatgctc agcctgggcaacgcgtttgatgaaaccaccatgctggagtttgatcgccgggtgaccgaa ggtctcgacctgccagcaggcgatctgtttggcggtggcgcggcggtggagtacagctgc gagcccaagctggatggcctggcggtcagcctgctgtaccgggatggcgagttggtacgg ggcgccacccgtggcgacggcaccaccggtgaagacatcagcgtcaacgtgcgcaccgtg cgcaatattccattgaaactgcacggcagcggctggccggccaccctcgaggtgcgcggc gaagtgttcatgtccaaggccggtttcgagcggctcaacgcctcgcaactggaagtcggc ggcaagaccttcgccaacccgcgcaatgcggcggccggcagcctgcgccagttggactcg aagatcactgccagccgcccgctggaattctgctgctacggcgtgaccaccgatatcagc gacacccacattggtaacctgcagcagcttaaaaaatggggcatgcccatcagtcacgag ctgaagctggccaagggcatccaggattgcctggagtactaccgcgatatcggcgagcgg cggaacagcctgccgtatgagatcgacggtgtggtgttcaaggtcaacagcattgcctcc cagcgcgaactgggcttccgcgcccgcgaaccgcgctgggccatcgcgcataaattcccg gccctggaggagctgaccgaactgctcgacgtggaattccaggttggccgcaccggcgcc gtcacgccggtggcgcgcttgaagccggtcaaggttgcgggcgtcaccgtgtccaacgcg accttgcacaacatggacgaagtggcgcgcctgggcgtgatgatcggcgataccgtgatc atccgccgtgccggtgacgtaatcccacaagtcgtgtcggtggtgcttgagcggcgcccg gcaacggcgcgtgcagtgccgatccccgagcgctgcccggtgtgcggttcccacgtggag cgcacgcaactggtcaagcgcagcaaaggcaaggaaaccgtcagcgaaggcgcggtgtac cgatgcgttggccgcctggcctgtggcgcgcaactcaagcaggcgatcatccattttgtc tcgcggcgtgccatggatatcgacggcctcggcgacaagaccatcgaacagttggtggat gaaaaactcattggctcgccggctgacctctacaaactgaagtacgagcagatcatcgac ctggaaggctttgccgatatttccagcaagaagctgattaccgccatcgaaaacagcaag actccgaccctggcgcgctttatctacgccctgggcatccccgacgtaggcgaggagacc gccaaggtgctggcgcgctccctggcctcgctggagcgtgtgcaacaggccttgccggaa gtgctgacgtacttgccggacgtgggcctggaagtggcgcacgagatccacagcttcttt gaagacagccataaccaggacgtgatcggtgcgctgctgtcgccggatgagtgcggcctg caattgcaggagcagggcgacctgagtgccgaattcgccgccagcaccaccttgggcggt ttgctcgacaagttgcacgtgccgagcgtcggcccgggcgctgcgcagaagctggcggac aagttcggctccctggacggcgtgatcaaggccgactggctggatatgcgccaggccctg cccgagaagcaggccaaggccgtacgcgagttcttcgataatgccgacaacgccaaccat gccctggccatcgagcagcagctcaaggacttcggcatgcactggctgagcgagaagaaa gtcgtcgaaggcttgcccgaagcggggcacacctgggtgctcaccggctcccttgagctg atgagtcgcgacgtggcgaaggaaaaactcgaaagcctcggcgccaaggtggcgggttcc gtctcggcgaaaacccattgcgtggtggcggggcccggcgcgggttccaagctggccaag gccagcgagttgggtttgaaggtattggatgaagaagccttcgtcgccttcctcgccaag cacaacatcacggtctga

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