Pseudomonas tohonis: TUM18999_05760 Help Entry TUM18999_05760    CDS       T07887                                  Symbol ligB Name (GenBank) DNA ligase B   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ptw  Pseudomonas tohonis Pathway ptw03030   DNA replication ptw03410   Base excision repair ptw03420   Nucleotide excision repair ptw03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ptw00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     TUM18999_05760 (ligB)    03410 Base excision repair     TUM18999_05760 (ligB)    03420 Nucleotide excision repair     TUM18999_05760 (ligB)    03430 Mismatch repair     TUM18999_05760 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ptw03032]     TUM18999_05760 (ligB)    03400 DNA repair and recombination proteins [BR:ptw03400]     TUM18999_05760 (ligB) Enzymes [BR:ptw01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      TUM18999_05760 (ligB) DNA replication proteins [BR:ptw03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      TUM18999_05760 (ligB) DNA repair and recombination proteins [BR:ptw03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      TUM18999_05760 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      TUM18999_05760 (ligB)    MMR (mismatch excision repair)     DNA ligase      TUM18999_05760 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       TUM18999_05760 (ligB) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_5 HHH RNA_ligase DUF3701 HHH_2 TilS Motif Other DBs NCBI-ProteinID:  BCG22385 UniProt:  A0A6J4DZ60 LinkDB All DBs Position complement(612372..614075) Genome browser AA seq 567 aa AA seqDB search MPNPLSTHLLALILGLPGIALAADDCPPWSDARAKRELHALHEQLSGWEHSYHRDRLSPV PDEIYDQVRSRFAELRQCFPQAEAQETQPLSTVGGKHTHPVAQTGLDKLEDAKALRAWMR GRDDLWVQPKVDGVAVTLVYRGGRLQQAISRGDGERGEDWTANARRIPAIPERLADPGDL VLQGELYWSLPGHVQAQAGGRGARGRVAGLMARQHLADEEARGIGLFVWDWPGGPGGMLQ RLDGLTRLGFADTQRHTLPVRSADQVAHWREHWYRSGLPFASDGVVVRQGVVPAARNWEA RPPHWAIAWKYPFAQALAEVRRVEFLVGRTGRITPRLLLSPVTLEDRRIQRVSLGSLEHW RELDIRPGDQVAVALAGLTIPRLESVVLRAGERVELEVPDPTALHALSCWHPTPGCEAQF RARLEWLSGSGGLAMRGVGPGTWERLLAAGRMEGLLDWLELEEEELARLPGFAHRNARRF REAAAEARRQPFARWLKALGLPPSGNADLEGGWEKLAARSEAQWQAVPGLGPERARQLRA FFHHPEVQALQERLAKAQVDGFGAAPQ NT seq 1704 nt NT seq  +upstreamnt  +downstreamnt atgcccaaccccctgtctacccacctgcttgccctgatcctcggcctgcccggcatagcc ctggccgccgacgattgtccgccctggagcgatgcccgcgccaagcgcgaactgcacgcc ctgcatgaacagctgtcgggctgggagcacagctaccaccgcgaccgcctctcgccggtc cccgacgagatctacgaccaggtgcgttcgcgcttcgccgaactgcgccagtgcttcccc caggccgaggcgcaggaaacgcagcccctgtcgacggtgggcggcaagcacacgcacccc gtcgcccagaccggcctcgacaagctggaggacgccaaggcgctgcgcgcctggatgcgc ggccgcgacgacctctgggtgcagcccaaggtggacggcgtggcggtgaccctggtctac cgcggcggccgcctgcagcaagccatcagccgtggcgatggcgagcgcggcgaagactgg acggccaacgcccggcgcatcccggccatccccgagcgcctcgccgacccgggcgacctg gtgctgcagggcgaactctactggtcgctgcccgggcacgtgcaggcgcaggccggaggg cgcggcgcacggggcagggtcgccgggttgatggccaggcagcacctggcggatgaggag gcccgcggcatcgggctgttcgtctgggactggcccggcggccccggcggcatgctgcaa cgcctggacgggctgacccgcctgggcttcgccgacacccagcgccataccctgccggtg cgaagcgccgaccaggtggcgcactggcgcgagcactggtatcgcagcggcctgcctttc gccagcgatggcgtggtggtccgccagggcgtggtgcccgccgcacgcaactgggaagca cgaccgccgcactgggccatcgcctggaagtaccccttcgcccaggccctggccgaggtg cggcgggtggaatttctggtcggccgcaccgggcgcatcaccccgcgcctgctgctctcg cccgtgacgctggaggaccggcgcatccagcgggtcagcctgggttccctggagcactgg cgcgagctggatatccgccccggcgaccaggtcgccgtcgccctggccgggctgaccatc ccgcgcctggagtcggtggtgctgcgggcaggcgagcgcgtggaactggaggtgccggac ccgaccgccctgcacgccctgagctgctggcacccgacgcccggctgcgaggcgcagttc cgtgcacgcctggagtggctgtccggcagcggtggcctggcgatgcgcggcgtcggcccc ggtacctgggagcggctgctggcggccggcaggatggaaggtctgctggactggctggag ctggaagaagaagagttggccaggctaccgggcttcgctcaccgcaatgcccggcgcttc cgggaggcggcggccgaggccaggcggcaacccttcgcccgctggctgaaggccctcggc ctgccgcccagcggcaacgccgacctggagggcggctgggagaaactggccgcccgttcg gaggcgcaatggcaagccgtgccaggcctgggccccgagcgcgcgcgacagctgcgggcg tttttccaccacccggaagtccaggcgctgcaagagcgcctggcgaaagcacaggtggat ggcttcggggccgcgcctcagtag

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