Pseudomonas tohonis: TUM18999_17560
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Entry
TUM18999_17560 CDS
T07887
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
ptw
Pseudomonas tohonis
Pathway
ptw00220
Arginine biosynthesis
ptw00250
Alanine, aspartate and glutamate metabolism
ptw00430
Taurine and hypotaurine metabolism
ptw00910
Nitrogen metabolism
ptw01100
Metabolic pathways
ptw01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ptw00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
TUM18999_17560 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
TUM18999_17560 (gdhB)
00220 Arginine biosynthesis
TUM18999_17560 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
TUM18999_17560 (gdhB)
Enzymes [BR:
ptw01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
TUM18999_17560 (gdhB)
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Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_ACT2
GDH_ACT3
GDH_HM3
GDH_HM1
GDH_HM2
TetR_C_31
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
BCG23565
UniProt:
A0A6J4E2I9
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All DBs
Position
1910331..1915196
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AA seq
1621 aa
AA seq
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MAFFTAASKADFQHQLQAALAQHVSEQALPQVALFAEQFFGIIALDELTQRRLSDLVGCT
LSSWRMLERFDPAKPQVRAFNPDYEKHGWQSTHTAVEVLHPDIPFLVDSVRMELNRRGYN
IHTLQNSVLSVRRNKKGELAEVLPKGTQGKDVQQESLMFLEIDRIAAPAALKALEKAIEE
MLGEVRIAVADFQPMTAKARDLLAWLDKAKLKVDKAELAEIKVFMNWLLDNHFTFLGYEE
FTVVDEGEAGGHLVYDEKSLLGVSRLRRTGLSAADLHVEKEAVDYLRGPVLLSFAKAAEP
SRVHRPAYPDFVSIRELDAKGRVVKECRFMGLYTSAVYAESVTEIPFIRGKVAEIQRRSG
FDPRAHLGKELGQVLEVLPRDDLFQTPVDDLFSTAMAIVQMQERNKIRLFLRRDPYGRFA
YALAYVPRDVYSTETRLKIQQILMDRLQASDCEFWTFFSESVLARVQFILRLDPKNKAVV
DPVRLEKEVIQACRSWKDDYASLVNESFGEAQGTRVLADFPKGFPAGYRERFAPHSAVVD
MQHLNSLSDERQLVMSFYQPLTQGEQLLHCKLYHADTPLPLSDVLPILENLGLRVLGEFP
YRLHRQDGREFWIHDFAFTSASGQEVDIQQLNDTLQDAFIHIVSGDAENDAFNRLVLTAS
MPWRDVALLRAYARYLKQIRLGFDLSYIASTLLNHVDIAKELVRLFKTRFYLARKLTAED
LEDKQQKLEQAILGELDNVAVLNEDRILRRYLDLIKATLRTNFYQPDANGQNKGYFSFKL
SPRLIPDIPRPVPKFEIFVYCPRVEGVHLRFGDVARGGLRWSDREEDFRTEVLGLVKAQQ
VKNAVIVPMGAKGGFIPRRLPVGGSRDDIQAEAIACYRIFISGLLDVTDNLKEGQVVPPA
NVVRHDADDPYLVVAADKGTATFSDIANGIALEYGFWLGDAFASGGSAGYDHKGMGITAK
GGWVSVQRHFRERGIDVQKDNVTVIGIGDMAGDVFGNGLLLSETLQLVAAFNHMHIFIDP
NPDAASSFVERKRLFDLPRSSWADYDAKLISAGGGIFLRSAKSIAISPEMKERFDIRADK
LTPTELLNALLKAPVDLLWNGGIGTYVKSSKESHADVGDKANDALRVDGRELRAKVVGEG
GNLGMTQLGRVEYGLNGGASNTDFIDNAGGVDCSDHEVNIKILLGEIVAAGDMTGKQRNK
LLADMTDAVGSLVLGNNYKQTQALSLAQRRARERIGEYKRLIAALEGAGKLDRALEFLPG
DEELNERAANGQGLTRPELSVLISYSKIDLKESLLKSLVPDDDYLAREMETAFPPLLASK
FGEAMRRHRLKREIISTQIANDLVNHMGITFVQRLKESTGMSAANVAGAYVVVRDVFRLP
HWWKQIESLDYKVPAELQLTLMDELMRLGRRATRWFLRSRREDQNAARDVGHFGPRVAEL
AGRLDELLEGPAREQWLARYQAYVEAGAPEELARVVAGTSHLYTLLPIIEASDVTGKDTA
EVAAAYFAVGGALDLSWYLQQITGLPVESNWQALAREAFRDDLDWQQRAITVSLLQMVDA
PVDMDERVALWLEQHRPLVERWKVMLTELRAATGTDYAMYAVANRELMDLAQSGQHGVKT
S
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcttcaccgcggccagcaaagccgacttccagcaccaactgcaagcggccctg
gcgcagcacgtcagcgaacaggccttgccacaagtagccctgttcgccgaacaattcttc
ggcatcatcgccctcgacgaactcacccagcggcgcctgtccgacctggtgggctgcacc
ctgtcgtcgtggcggatgctggaacgcttcgacccggccaagccgcaggtgcgcgccttc
aaccccgactacgaaaagcacggctggcaatccacccacaccgcagtggaagtgctgcac
cccgacatccccttcctggtggactcggtgcgcatggagctgaaccgccgcggctacaac
atccatacgctgcagaacagcgtgctcagcgtgcgccgcaacaagaagggcgagctcgcc
gaagtgctgcccaagggcacccagggcaaggacgtgcagcaggaatcgctgatgttcctg
gagatcgatcgcatcgccgcgcccgccgccctcaaggccctggagaaggccatcgaggag
atgctcggcgaggtgcgcatcgccgtcgccgacttccagcccatgaccgccaaggcccgc
gacctgctggcctggctggacaaggccaagctgaaggtggacaaggccgagctggccgag
atcaaggtcttcatgaactggttgctggacaaccacttcaccttcctcggctacgaggag
ttcaccgtggtggacgagggcgaggccggcggtcacctggtctatgacgagaagtccctg
ctcggtgtctcgcgcctgcgccgcaccggcctcagcgccgcggacctgcacgtcgagaag
gaggccgtcgactacctgcgcggcccggtgctgctgtccttcgccaaggccgccgagccg
agccgtgtgcaccgcccggcctacccggatttcgtttccatccgcgagctggacgccaag
gggcgcgtggtcaaggaatgccgcttcatgggcctgtacacctctgcggtgtatgccgag
agcgtgaccgagatccccttcatccgcggcaaggtcgccgagatccagcgccgctccggc
ttcgacccccgtgcccacctcggcaaggaactgggccaggtgctggaagtgctgccccgc
gacgacctgttccagaccccggtggacgacctgttctccaccgccatggccatcgtgcag
atgcaggaacgcaacaagatccgcctgttcctgcgccgcgacccctacgggcgtttcgcc
tatgcgctggcttacgtgccgcgcgacgtctattccaccgagacgcgcctgaagatccag
cagatcctcatggaccgcctgcaggccagcgactgcgagttctggaccttcttctccgaa
tccgtgctggcgcgcgtgcagttcatcctgcgcctggacccgaagaacaaggccgtggtc
gacccggtgcgcctggagaaggaagtgatccaggcctgccgttcctggaaggacgactac
gccagcctggtcaacgaaagcttcggcgaagcccagggcacccgtgtgctggccgacttc
ccgaaaggcttccccgccggctaccgcgagcgcttcgccccgcactcggccgtggtcgac
atgcagcacctcaacagcctctccgacgagcgccagctggtgatgagcttctaccagccg
ctgacccagggcgagcagctgctgcactgcaagctgtaccacgccgacacgccgctgccg
ctgtccgacgtcctgccgatcctggagaacctcggcctgcgcgtgctcggcgagttcccc
tatcgcctgcaccgccaggacggccgcgagttctggatccacgacttcgccttcaccagt
gcctcgggccaggaagtcgacatccagcagctcaacgacaccctgcaggacgccttcatc
cacatcgtcagcggtgacgccgagaacgacgccttcaaccgcctggtgctgaccgcctcc
atgccctggcgcgacgtggcgctgctgcgcgcctatgcccgctacctgaagcagatccgc
ctgggcttcgacctgtcctacatcgccagcacgctgctgaaccatgtggacatcgccaag
gagctggtgcgtctgttcaagacccgcttctacctggcccgcaagctcaccgccgaggac
ctggaagacaagcagcagaagctcgaacaggccatcctcggcgagctggacaacgtcgcc
gtgctcaacgaggaccgcatcctgcggcgctacctcgacctgatcaaggcgaccctgcgc
accaacttctaccagcccgatgccaacggccagaacaagggctacttcagcttcaagctg
agcccgcggctgatccccgacatcccgcgcccggtgcccaagttcgagatcttcgtctac
tgcccgcgcgtcgagggcgtgcacctacgcttcggcgacgtcgcccgtggcggcctgcgc
tggtccgaccgcgaggaagacttccgcaccgaggtgctgggcctggtcaaggcgcagcag
gtgaagaacgcggtgatcgtgcccatgggcgccaagggtggcttcatcccccggcgcctg
ccggtgggcggcagccgtgacgacatccaggccgaggccatcgcctgctaccgcatcttc
atcagcggcctgctggacgtcaccgacaacctcaaggaaggccaggtggtaccgccggcc
aacgtggtgcgccacgacgccgatgacccctacctggtggtggcggccgacaagggcacc
gcgaccttctccgacatcgccaacggcatcgccctggaatacggcttctggctgggcgac
gccttcgcttccggcggctccgccggctacgaccacaagggcatgggcatcaccgccaag
ggcggctgggtctcggtgcagcgccacttccgcgagcgcggcatcgacgtgcagaaggac
aacgtcaccgtgatcggcatcggcgacatggccggcgacgtattcggcaacggcctgctg
ctgtcggaaacgctgcagctggtggcggccttcaaccacatgcacatcttcatcgacccg
aacccggacgcggccagcagcttcgtcgagcgcaagcgcctgttcgacctgccgcgttcc
tcctgggccgactacgacgccaagctgatctccgccggcggcggcatcttcctgcgcagc
gccaagagcatcgccatcagcccggaaatgaaggaacgcttcgacatccgtgccgacaag
ctgacccccaccgaactgctcaacgccctgctcaaggcaccggtcgacctgctgtggaac
ggcggcatcggcacctacgtgaagtcgagcaaggagtcccacgccgatgtcggcgacaag
gccaacgacgccctgcgcgtggacggtcgcgagctgcgtgccaaggtggtgggcgagggt
ggcaacctcggcatgacccagctcggccgcgtcgaatacggcctcaacggcggcgccagc
aacaccgacttcatcgacaacgccggtggcgtggactgctccgaccacgaggtgaacatc
aagatcctcctgggcgagatcgtcgcggccggcgacatgaccggcaagcaacgcaacaag
ctgctggcggacatgaccgacgcggtgggcagcctggtgctgggcaacaactacaagcag
acccaggcgctgtccctggcgcaacgccgcgcgcgcgagcgcatcggtgaatacaagcgc
ctgatcgccgcgctggagggcgccggcaagctggaccgcgcgctggaattcctgcccggt
gacgaggagctcaacgagcgcgccgccaacggccaggggctgacccggccggagctgtcg
gtgctgatctcctatagcaagatcgacctcaaggaatcgctgctcaagtccctggtaccg
gacgacgactacctcgcccgcgagatggagaccgccttcccgccgctgctggcgagcaag
ttcggcgaggccatgcgccgccaccgcctgaagcgcgagatcatcagcacccagatcgcc
aacgacctggtcaaccacatgggcatcaccttcgtgcagcgcctgaaggagtccaccggc
atgagcgcggccaacgtcgccggtgcctacgtggtggtgcgcgatgtgttccgcctgccg
cactggtggaagcagatcgagtcgctggattacaaggtgcccgccgaactgcagctgacc
ctgatggacgagctgatgcgccttggccgtcgcgccacccgctggttcctgcgcagccgc
cgcgaagaccagaacgccgcccgtgacgtcggccacttcggcccacgcgtggccgagctg
gccggccgcctggacgagctgctggagggcccggcccgcgagcagtggctggcccgctac
caggcctacgtcgaggccggcgcaccggaggaactggcccgcgtggtggccggcaccagc
cacctgtacacgctgctgccgatcatcgaggcctcggacgtcaccggcaaggacacggcc
gaagtggcggccgcctacttcgccgtcggtggcgcgctggacctgtcctggtacctgcag
cagatcaccggcctgccggtggagagcaactggcaggcgctggcgcgcgaagccttccgt
gacgacctcgactggcaacagcgggcgatcaccgtttcgctgctgcagatggtcgatgcc
ccggtcgacatggacgagcgcgtggccctgtggctggaacagcaccgtccgctggtggag
cgctggaaggtgatgctcaccgaactgcgcgccgccaccggcaccgactacgccatgtat
gccgtggccaaccgcgagctgatggacctggcccagagcggccagcatggggtcaagacc
tcctga
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