Candidatus Pelagibacter ubique: SAR11_0064
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Entry
SAR11_0064 CDS
T00257
Symbol
rsbU
Name
(GenBank) Sigma factor sigB regulation protein
KO
K07315
phosphoserine phosphatase RsbU/P [EC:
3.1.3.3
]
Organism
pub
Candidatus Pelagibacter ubique
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pub03021
]
SAR11_0064 (rsbU)
Enzymes [BR:
pub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.3 phosphoserine phosphatase
SAR11_0064 (rsbU)
Transcription machinery [BR:
pub03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SAR11_0064 (rsbU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIIE
GAF_2
GAF_3
GAF
Mre11_C_bact
Motif
Other DBs
NCBI-ProteinID:
AAZ20889
UniProt:
Q4FPK0
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All DBs
Position
complement(77115..78461)
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AA seq
448 aa
AA seq
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MNNEFHQSQNYQKFNEYQFINNMFFGAKKTETIKVDNTSVKDLELVTKMSQEFAKTLDLK
ETLQTSLELIIKRINAQAANIFLIDNDKQNFQCIASKHQAYLEDFEIPITQGVMGKAALM
KQCIRVGDVRKDVREIAEFYFDLDNKTNFTTYSVLCSPLIVSDECIGVIHCLNKKTDNKL
FEESDRKLLETLSGPAALAIRNAKMAKDLIVKNRIEKEIEIVGEIQKTLLSQNIKENFPI
AGINIPAKVVSGDFYNFSELSNGVYGFGVADVSGKGIKSSLLMSKASSLYRCLSKTNFSA
AGLLDILNTEICETTSRGMFVTMLVGIYDSNKKELTLSNAGHEPPLIYSKDGNFSNFEEA
GPPLGIAPKFKFKETKINFSNSSMYIFTDGITEIRDAKGNMLEAEGFKDYIKKYQQIPNH
ERLNKIIEDIIKSGRIQKDDLTIVTVDG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgagttccatcagtctcaaaactatcaaaaatttaatgaatatcaatttata
aataacatgttttttggtgctaaaaaaacagaaacaataaaagtcgacaatacgagcgtt
aaagacttagaattggttacaaaaatgagccaggagtttgctaaaactcttgatttaaaa
gaaacactacaaacttcattagagctaattattaaaagaattaatgctcaagctgctaac
atttttttaatagataatgataagcaaaactttcaatgtattgcatcaaaacaccaagca
tatctagaagattttgaaattccaattactcaaggtgtcatgggaaaagcagcactcatg
aaacaatgtataagagttggagatgttagaaaggatgtaagagaaattgcagaattttat
tttgatttagataataaaacaaattttacaacttattctgttttatgttcaccattaatt
gtttcagatgaatgtattggtgttattcattgtttaaataaaaaaacagacaacaaactt
tttgaagaaagcgatagaaaacttttagaaactttatctggtcctgctgcattagcaatt
agaaatgctaagatggcaaaagatttgattgttaaaaatagaatagaaaaagaaatagaa
attgttggagagattcaaaaaacattactatctcaaaacattaaagaaaattttcctatt
gctggaataaatattcctgccaaggttgtttctggagacttttataatttttcagaatta
tccaatggagtttatggatttggagttgcagatgtttcaggtaaaggaattaaatcttca
ttactaatgtctaaagcatctagtctttatagatgtttaagtaaaacaaatttttctgca
gcaggtcttttagatattttaaatacagaaatttgtgaaactacttcaagaggaatgttt
gtaacaatgctggttggaatttacgatagtaacaaaaaagaattaactttatcaaacgct
ggtcatgaacctccgttaatttattctaaagatggaaacttttctaattttgaagaagca
ggacctcctttaggcattgctcctaagtttaaatttaaagaaactaaaattaatttttca
aacagctcaatgtatatttttactgatggtattacggaaataagagatgctaaaggaaat
atgttagaggcagaaggatttaaagattatataaaaaagtatcaacaaattccaaaccat
gaaagattaaacaagattatcgaggatataattaaatctggtcgaatacaaaaggatgat
ttaacaattgtaacggttgatggttaa
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