Candidatus Pelagibacter ubique: SAR11_0365
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Entry
SAR11_0365 CDS
T00257
Symbol
nth
Name
(GenBank) probable endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pub
Candidatus Pelagibacter ubique
Pathway
pub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAR11_0365 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pub03400
]
SAR11_0365 (nth)
Enzymes [BR:
pub01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SAR11_0365 (nth)
DNA repair and recombination proteins [BR:
pub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAR11_0365 (nth)
Prokaryotic type
SAR11_0365 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AAZ21187
UniProt:
Q4FNQ2
LinkDB
All DBs
Position
complement(356265..356918)
Genome browser
AA seq
217 aa
AA seq
DB search
MDEKDKAKTILKILNKLYPTTPIPLDHINNFTLLMSVLLSAQCTDLNVNNVTKNIYPKYN
KPEHFVKLGKKRIEKLIKSIGLFRVKAKSIYLMSKQLLEKHGGKVPKSFEELEKLPGVGH
KTASVVMSQGFGVPAFAVDTHIHRLAQRWGLTNGKNVIQTEKDLKRIFPEKTWSKLHLQI
IYYGREFCKARECYGLTCKICTTCYPNRKNPVKIKKA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaagataaagcaaaaacaatactaaaaattttaaataaactttatccaaca
acccctatcccgctagatcatattaataactttactctcttaatgtcagttcttttatcg
gcacaatgtactgatctaaatgttaataatgtaactaaaaatatatatccaaaatataat
aaacctgagcattttgtaaaattaggcaaaaaacgaatagaaaaattgattaaaagtatt
ggtctctttcgagttaaggctaaaagtatttatttgatgtctaaacagcttcttgaaaag
catggaggcaaagtacccaaaagctttgaagagctcgaaaaactgcctggtgtaggccat
aaaactgcaagtgtggttatgtctcaaggttttggagttccagcttttgcagttgatacc
cacatccatagattagctcaaagatggggtttaacaaatggcaaaaatgtaattcaaact
gaaaaagatttaaaaagaatattcccagaaaaaacatggagcaaattgcatttacaaata
atttattatggaagagaattttgtaaggcaagggaatgttatggtttgacttgtaaaatt
tgcacgacttgttatcctaatcgaaaaaatccagttaaaataaaaaaagcttaa
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