Panthera uncia (snow leopard): 125918656
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Entry
125918656 CDS
T08832
Name
(RefSeq) antiviral innate immune response receptor RIG-I isoform X1
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04064
NF-kappa B signaling pathway
puc04622
RIG-I-like receptor signaling pathway
puc04623
Cytosolic DNA-sensing pathway
puc05160
Hepatitis C
puc05161
Hepatitis B
puc05162
Measles
puc05164
Influenza A
puc05168
Herpes simplex virus 1 infection
puc05169
Epstein-Barr virus infection
puc05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125918656
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
125918656
04623 Cytosolic DNA-sensing pathway
125918656
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
125918656
05160 Hepatitis C
125918656
05171 Coronavirus disease - COVID-19
125918656
05164 Influenza A
125918656
05162 Measles
125918656
05168 Herpes simplex virus 1 infection
125918656
05169 Epstein-Barr virus infection
125918656
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
puc04054
]
125918656
Enzymes [BR:
puc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
125918656
Pattern recognition receptors [BR:
puc04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
125918656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C
RIG-I_C-RD
DEAD
ResIII
Helicase_C
AAA_22
AAA_25
CCDC85
Motif
Other DBs
NCBI-GeneID:
125918656
NCBI-ProteinID:
XP_049480689
LinkDB
All DBs
Position
D4:complement(53502721..53563821)
Genome browser
AA seq
929 aa
AA seq
DB search
MTAEERRNLRAFQDYVIKILDPTYILSYMSPWFKDDEVQYIRAEKNNKGTMEAASLFLKF
LLELQEEGWFRGFLDALAHAGYSGLYEAIESWDFQTIERLEEYRSLLKRLQPEFKTTVNP
KDILPEVSKCLISQECEEIMQVCSNKGLMAGAEKMVECFLRSDKENWPKTLKLALDKEES
KFSELWTVDKGAKNIDVKVLEDDEMETSDIQIFYKEESECQNLSQNSCPSSEVSHIYTPV
KPRNYQLELALPAKEGKNTIICAPTGCGKTFVSLLICEHHLKKFPQGQKGKVVFFAVQLP
VYEQQKSVFSNYFERLGYKVAGVSGATSENVSVKQIVENNDIIILTPQILVNSLKNGTIP
SLSVFTLMIFDECHNTGKHHPYNMIMFNYLDQKLGGSSDPLPQVIGLTASVGIGDAKSTA
EAVEYICRLCASLDTSVIATVKDNLEELEEIVYKPQKFFRKVESRTTDRFKCIISQLMRE
TESLAKSIFDEIGTITLEGISQIQNREFGTQKYEQWIVTVQKACTVFQLPDKDEESRICK
ALFLYTSHLRKYNDALIINEHARMKDALDYLKDFFTNVRAAGFDEIEQDLTRRFEEKLQK
LESVSMDPSNENPKLKDLCFILQEEYHLNPESRTILFVKTRALVDALKKWIEENSELSFL
KPGILTGRGKTNQNTGMTLPAQKCALDAFRTNGDKKILIATSVADEGIDIAECNLVILYE
YVGNVIKMIQTRGRGRARGSKCFLLTSNAVVIEKEKINIYKEKMMNDSISMLQTWNEVVF
KEKVLQIQIQEKVIRDRQGKVEPVPDKENKKLLCRKCKAFACYTVDIRVVEECHYTVVGD
AFRKCFVSKLHPKPKSFGYFEKRAKIFCARPNCSHDWGIHVKYKIFEIPVIKIESFVVED
IATGAQKLYAKWKDFHFEKIPFDAKEMSK
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaggagaggaggaatctgcgcgccttccaggactatgtcatcaagattctg
gaccctacctatatcctgagctacatgtcgccctggtttaaggacgatgaggtgcagtat
attcgggctgagaaaaacaataagggcacgatggaggctgcctcactttttcttaagttc
ctattggagctccaggaagaaggctggttccgtggctttttggatgcccttgctcatgca
ggttattctggactttatgaagccattgaaagttgggatttccaaaccattgaaaggttg
gaggagtataggtcactgttaaagcgtttacaaccagaatttaaaactacagttaatcca
aaagatatccttcctgaagtatctaaatgtttaattagtcaggaatgtgaagaaattatg
caggtttgttccaacaaggggctgatggcaggtgcagagaaaatggttgaatgctttctc
agatcggacaaggaaaactggcccaaaactttgaaacttgctttggacaaagaagagagc
aagttcagtgaactgtggactgtggacaaaggtgcaaagaatattgacgtgaaagttctt
gaggatgatgaaatggaaacttctgacatacagattttctacaaggaagaatctgaatgc
cagaatcttagtcagaattcatgtccatcttcagaagtctctcatatttacaccccagtg
aagccaagaaattaccaactagagcttgctttgcctgctaaggaaggaaaaaacacaata
atatgtgctcctactggttgtggaaaaacctttgtttcacttcttatatgtgagcatcat
ctgaaaaaatttccgcaaggacaaaaggggaaggttgtcttttttgctgttcaactccca
gtgtatgaacagcagaaatctgtgttctcaaactattttgaaagacttgggtacaaagtt
gcaggtgtttctggagcaacgtctgagaatgtctcagtgaaacagattgttgagaacaat
gacatcatcattttaactccacagattcttgtgaatagtcttaaaaatgggactattcca
tcactctctgtctttactttgatgatatttgatgaatgtcacaatactggtaaacaccat
ccttataatatgatcatgtttaattatctagatcagaaacttggaggatcttcagaccca
ctgcctcaggtcatcgggctgactgcctcggttggcattggggatgccaaaagcacagca
gaagccgtggaatatatctgcagactgtgtgcttctcttgacacatcagtgatagcaaca
gtcaaagacaacttggaggaactggaagaaattgtttataagccccaaaagtttttcagg
aaagtggaatcacggaccactgacagatttaaatgcatcatctctcagctgatgagggaa
acagagagtctggcaaagagtatctttgacgaaatcggtaccataactctcgaaggtata
tctcaaattcaaaatagggaatttggaacgcagaaatatgaacaatggatcgttactgtt
cagaaagcatgcacggtgtttcagttgcctgacaaagatgaagagagcaggatttgtaaa
gcactgtttttgtacacttcccatttgcggaaatataatgatgccctcattatcaatgag
catgcgcgaatgaaagatgctctggattacttgaaagacttcttcaccaacgtccgagcg
gcaggatttgatgagattgagcaagatctcactcggagattcgaagaaaagctgcagaaa
ctggaaagcgtttctatggatcccagcaatgagaacccaaaactcaaagatctctgcttc
atcttgcaagaggagtaccacttaaacccagagagtagaaccatcctctttgtgaaaacc
agagcacttgtggatgctttgaagaaatggattgaagaaaattctgaactcagctttcta
aaacctggcatattgactggacggggcaaaacaaatcagaacacagggatgacactccca
gcacagaagtgtgcattggatgcattcagaactaatggagataaaaagattctgatcgcg
acttcagttgctgatgaaggcattgacattgctgagtgcaatttggtcatcctgtatgag
tatgtgggcaatgtcatcaaaatgatccaaactagaggcagaggaagagcgagaggtagc
aagtgcttccttctgactagtaatgctgttgtaattgaaaaagaaaaaataaatatatac
aaagaaaaaatgatgaatgactccatttcaatgcttcagacatggaatgaagtagtattt
aaagaaaaggttctccagatacagattcaagaaaaagtcatcagggataggcaaggaaaa
gtagaacctgtacctgataaggaaaataaaaaactgctctgcagaaagtgcaaagccttt
gcatgttacactgttgatatcagagtggtggaggaatgccattacactgtggttggagat
gctttcaggaagtgctttgtgagtaaactacaccccaaaccaaagagctttggatatttt
gagaagagagcaaagatcttctgtgccagaccaaactgcagccatgactggggaatccat
gtgaagtataagatatttgagattccagttataaaaatagaaagttttgtggtggaggat
attgcaactggagctcagaaactatatgcaaagtggaaggactttcattttgagaagata
ccatttgatgctaaggaaatgtccaaatga
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