Panthera uncia (snow leopard): 125923516
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Entry
125923516 CDS
T08832
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
puc
Panthera uncia (snow leopard)
Pathway
puc04010
MAPK signaling pathway
puc04064
NF-kappa B signaling pathway
puc04071
Sphingolipid signaling pathway
puc04137
Mitophagy - animal
puc04141
Protein processing in endoplasmic reticulum
puc04210
Apoptosis
puc04217
Necroptosis
puc04380
Osteoclast differentiation
puc04621
NOD-like receptor signaling pathway
puc04622
RIG-I-like receptor signaling pathway
puc04657
IL-17 signaling pathway
puc04668
TNF signaling pathway
puc04920
Adipocytokine signaling pathway
puc04932
Non-alcoholic fatty liver disease
puc05010
Alzheimer disease
puc05014
Amyotrophic lateral sclerosis
puc05016
Huntington disease
puc05017
Spinocerebellar ataxia
puc05022
Pathways of neurodegeneration - multiple diseases
puc05132
Salmonella infection
puc05135
Yersinia infection
puc05160
Hepatitis C
puc05163
Human cytomegalovirus infection
puc05167
Kaposi sarcoma-associated herpesvirus infection
puc05168
Herpes simplex virus 1 infection
puc05169
Epstein-Barr virus infection
puc05170
Human immunodeficiency virus 1 infection
puc05200
Pathways in cancer
puc05203
Viral carcinogenesis
puc05222
Small cell lung cancer
puc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
puc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125923516
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125923516
04064 NF-kappa B signaling pathway
125923516
04668 TNF signaling pathway
125923516
04071 Sphingolipid signaling pathway
125923516
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
125923516
09143 Cell growth and death
04210 Apoptosis
125923516
04217 Necroptosis
125923516
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125923516
04622 RIG-I-like receptor signaling pathway
125923516
04657 IL-17 signaling pathway
125923516
09152 Endocrine system
04920 Adipocytokine signaling pathway
125923516
09158 Development and regeneration
04380 Osteoclast differentiation
125923516
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125923516
05203 Viral carcinogenesis
125923516
09162 Cancer: specific types
05222 Small cell lung cancer
125923516
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
125923516
05160 Hepatitis C
125923516
05168 Herpes simplex virus 1 infection
125923516
05163 Human cytomegalovirus infection
125923516
05167 Kaposi sarcoma-associated herpesvirus infection
125923516
05169 Epstein-Barr virus infection
125923516
09171 Infectious disease: bacterial
05132 Salmonella infection
125923516
05135 Yersinia infection
125923516
09164 Neurodegenerative disease
05010 Alzheimer disease
125923516
05014 Amyotrophic lateral sclerosis
125923516
05016 Huntington disease
125923516
05017 Spinocerebellar ataxia
125923516
05022 Pathways of neurodegeneration - multiple diseases
125923516
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125923516
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
125923516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
puc03019
]
125923516
04121 Ubiquitin system [BR:
puc04121
]
125923516
Enzymes [BR:
puc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125923516
Messenger RNA biogenesis [BR:
puc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
125923516
Ubiquitin system [BR:
puc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
125923516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-RING_6
zf-C3HC4_4
MATH
SlyX
Motif
Other DBs
NCBI-GeneID:
125923516
NCBI-ProteinID:
XP_049487818
LinkDB
All DBs
Position
D4:90857324..90879655
Genome browser
AA seq
523 aa
AA seq
DB search
MAAASVTPPGSLDVLQPGFSKTLLGTKPEDKYLCSACRNVLRRPFQAQCGHRYCSYCLTS
ILSSGPQNCAACVHEGIYEEGISILESGSAFPDNAARREVESLPAVCPSDGCTWKGTLKE
YESCHEGHCPFMLTECPACRGLVRLGEKERHSEQECPERSLSCRHCRAPCCWADLKAHHE
VCPKFPLTCDGCGKKKISREKFQDHVRACGRCRVPCRFRAVGCPEMVESEKQQQHEAQWL
REHLAMLLGGLLEARHPSGADGRFLGQGEVGGWEAGTLHPEAELPKAAELRQRCEALERK
TATFENIVCVLNREVERVAMTAEACGRQHRLDQDRIEALSNKVQQLERSIGLKDLAMAEL
EQKVHEMEASTFDGVFLWKISDFARKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRIYLNG
DGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHVIDAFRPDVTSSSFQR
PVSDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVDLTGL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggccagcgtgacccctcccggctccctagacgtgttgcagcccggcttctca
aagaccctgctggggaccaagccagaggacaagtacctgtgctcggcctgcaggaacgtc
ctgcgcaggcccttccaggcacagtgcggccaccgctactgctcctactgcctgaccagc
atcctgagctccgggcctcagaactgtgccgcctgtgttcacgaagggatatacgaagag
ggcatttctattttggaaagcggctcggcgttcccggacaacgctgcgcgcagggaggtg
gagagcctgccggccgtgtgtcccagcgacggctgcacctggaaggggacccttaaagag
tatgagagctgccacgaaggacactgcccgttcatgctgaccgagtgcccggcgtgcaga
ggcctggttcgcctcggagagaaggagcggcactcggaacaggagtgcccggagaggagc
ctcagctgcaggcactgccgggcgccctgctgctgggccgacctgaaggcgcaccacgaa
gtctgccccaagttccccctgacctgtgacggctgtggcaagaagaagatctcccgcgag
aaattccaggaccacgtccgggcatgtggcagatgccgagtcccgtgcaggttccgtgct
gtcggctgccccgagatggtggagagtgagaagcagcagcagcacgaggcccagtggctc
cgggagcacctggccatgctgctgggcggcctcctggaggccaggcacccgtcgggggcc
gatggccgcttcctgggccaaggcgaggtcgggggctgggaagccggcacgctgcacccc
gaggccgagctccccaaggccgcggagctccggcagcggtgtgaggccctggagaggaag
acggccaccttcgagaacatcgtctgcgtcctgaaccgggaggtggagagggtggccatg
accgccgaggcctgtggccggcagcaccgactggaccaggacaggatcgaggccctgagt
aacaaggtgcagcagctggagaggagcatcggcctgaaggacctggccatggccgagctg
gagcagaaggtccacgagatggaggcgtccaccttcgacggcgtgtttctctggaagatc
tcggatttcgccaggaagcgccaggaagctgtggctggccgcacgcccgccatcttctct
ccagccttctacacgagcaggtacggctacaagatgtgtctgcgcatctacctgaacgga
gatggcaccgggcgcgggacgcacctgtctctcttctttgtggtgatgaagggccccaac
gacgccctcctgcggtggcccttcaaccaaaaggtgaccttaatgctgcttgaccagaac
aaccgggagcacgtgatcgacgcctttagacccgacgtgacctcgtcctccttccagagg
ccagtcagcgacatgaacatcgcgagcggctgccccctcttctgccccgtttccaagatg
gaggccaagaattcctacgtgcgcgatgacgccatcttcatcaaggccattgtggacctg
acggggctctag
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integrated database retrieval system