Panthera uncia (snow leopard): 125934537 Help Entry 125934537         CDS       T08832                                  Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism puc  Panthera uncia (snow leopard) Pathway puc04010   MAPK signaling pathway puc04064   NF-kappa B signaling pathway puc04120   Ubiquitin mediated proteolysis puc04140   Autophagy - animal puc04144   Endocytosis puc04380   Osteoclast differentiation puc04620   Toll-like receptor signaling pathway puc04621   NOD-like receptor signaling pathway puc04622   RIG-I-like receptor signaling pathway puc04657   IL-17 signaling pathway puc04722   Neurotrophin signaling pathway puc04936   Alcoholic liver disease puc05132   Salmonella infection puc05133   Pertussis puc05135   Yersinia infection puc05140   Leishmaniasis puc05142   Chagas disease puc05145   Toxoplasmosis puc05152   Tuberculosis puc05160   Hepatitis C puc05161   Hepatitis B puc05162   Measles puc05168   Herpes simplex virus 1 infection puc05169   Epstein-Barr virus infection puc05170   Human immunodeficiency virus 1 infection puc05171   Coronavirus disease - COVID-19 puc05200   Pathways in cancer puc05222   Small cell lung cancer puc05235   PD-L1 expression and PD-1 checkpoint pathway in cancer puc05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:puc00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     125934537  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     125934537    04064 NF-kappa B signaling pathway     125934537  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     125934537    04140 Autophagy - animal     125934537  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     125934537    04621 NOD-like receptor signaling pathway     125934537    04622 RIG-I-like receptor signaling pathway     125934537    04657 IL-17 signaling pathway     125934537   09156 Nervous system    04722 Neurotrophin signaling pathway     125934537   09158 Development and regeneration    04380 Osteoclast differentiation     125934537  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     125934537    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     125934537   09162 Cancer: specific types    05222 Small cell lung cancer     125934537   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     125934537    05161 Hepatitis B     125934537    05160 Hepatitis C     125934537    05171 Coronavirus disease - COVID-19     125934537    05162 Measles     125934537    05168 Herpes simplex virus 1 infection     125934537    05169 Epstein-Barr virus infection     125934537   09171 Infectious disease: bacterial    05132 Salmonella infection     125934537    05135 Yersinia infection     125934537    05133 Pertussis     125934537    05152 Tuberculosis     125934537   09174 Infectious disease: parasitic    05145 Toxoplasmosis     125934537    05140 Leishmaniasis     125934537    05142 Chagas disease     125934537   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     125934537   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     125934537  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:puc04131]     125934537    04121 Ubiquitin system [BR:puc04121]     125934537 Enzymes [BR:puc01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      125934537 Membrane trafficking [BR:puc04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     125934537 Ubiquitin system [BR:puc04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     125934537 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-TRAF_2 zf-RING_5 U-box TRAF3_RING RING_XB3-XBAT31 Med21 DUF4455 zf-RING_11 Spc29 SlyX Sina_ZnF Laminin_I DUF16 EzrA CENP-F_leu_zip Motif Other DBs NCBI-GeneID:  125934537 NCBI-ProteinID:  XP_049503933 LinkDB All DBs Position D1:23666050..23683808 Genome browser AA seq 541 aa AA seqDB search MSLLNCENSCGSSQSESDCCAAMASSCSAAAKDDSVSGTASTGNLSSSFMEETQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCRACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMNCPQCQRPFQKCQLNIHILQ ECPRRQVSCVNCAALMAFEDKEIHDQNCPLANVICEYCSTMLIREQMPNHYDLDCPTAPI PCTFSTFGCHVKMQRNHLARHLQENTQSHMRMLAQAVQSLSLALPPVPQCDMPPYDSSSA SRVSTGCHPEVQNFQETIQQLEGRLVRQDHQIRELIAKMETQSMYVSELKQTIRTLEDKV VEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPSAQ RCANYISLFVHTMQGEYDSHLPWPFQGTIRLTILDQSEAPIRQNHEEIMDAKPELLAFQR PTIPRNPKGFGYVTFMHLEALRHRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDSG M NT seq 1626 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaaaacagctgcggatccagccagtctgagagtgactgctgt gccgccatggccagctcctgtagtgctgcggcgaaagatgacagtgtgagtggaaccgcc agcacggggaacctctccagctctttcatggaagagacccaggggtatgacgtggagttt gacccgcccctggagagcaagtatgagtgccccatctgcctgatggctctccgggaggca gtgcagacaccgtgcggccacaggttctgcagagcttgcatcatcaaatcaataagggat gcaggtcacaaatgtccagttgacaatgaaatactgctggaaaatcaactatttcctgac aattttgcaaaacgagagattctttctctgatggtgaaatgtccaaatgaaggttgtttg cacaagatggaactgaggcatcttgaggatcaccaagcacattgtgaatttgctcttatg aattgtcctcagtgccagcgtcccttccaaaaatgccaacttaacattcacattctccag gagtgtccaaggagacaggtttcttgtgtaaactgtgctgcattgatggcatttgaagat aaagagatccacgaccagaactgtcctttggcaaatgtcatctgtgaatactgcagtacc atgctcatcagagaacagatgcctaatcattacgacctggactgtcctacagccccaatt ccatgcacattcagtacttttggttgccatgtaaagatgcagaggaatcacttggcacgc cacctgcaagagaatacccagtcgcacatgagaatgttggcccaggctgttcagagttta agccttgcgttacctcctgtacctcagtgtgatatgcctccatacgattcttcctctgcg tcccgggtttccactgggtgtcacccagaggtccagaatttccaagaaaccattcagcag ttagagggtcgccttgtaagacaagaccatcaaatccgagagctaattgctaaaatggaa actcagagcatgtacgtaagtgagctcaaacaaacgattcgaacccttgaggacaaagtt gttgaaatagaagcacagcagtgcaatgggatttacatctggaagattggcaactttggg atgcatttgaaatctcaagaagaggagaaacctgttgtcattcatagccctggattctac acaggcaaacccgggtacaaactgtgcatgcgcctgcaccttcagttaccgtcggctcag cgctgtgctaattacatatccctctttgtgcacacaatgcaaggagagtatgacagccac ctcccttggcccttccaaggtacaatccgccttacaattcttgatcagtctgaggcacct ataaggcaaaaccatgaagagatcatggatgccaaaccagagctgcttgccttccagaga cccacaatcccacggaacccaaaaggttttggctatgtgacttttatgcatctggaagcc ctgagacacagaaccttcattaaggacgatactttattagtgcgctgtgaggtctctacc cgctttgacatgggtagtctccggagggagggttttcagccacgaagtactgattcaggg atgtag

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