Pantoea vagans C9-1: Pvag_0127
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Entry
Pvag_0127 CDS
T01326
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pva
Pantoea vagans C9-1
Pathway
pva00540
Lipopolysaccharide biosynthesis
pva01100
Metabolic pathways
Module
pva_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Pvag_0127 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pva01005
]
Pvag_0127 (lpxC)
Enzymes [BR:
pva01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Pvag_0127 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
pva01005
]
Lipid A
Pvag_0127 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
ADO08347
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All DBs
Position
142821..143738
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AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTLRPASANTGVIYRRTDLNPPVDFPADAKYVRDT
MLSTCLVNDEGVRISTVEHLNAALAGLGIDNIIVEVDAPEIPIMDGSAAPFIYLLMDAGI
EQLNSAKKFVRVKQTVRVEEGDKWAEIKPYNGFSLDFTIDFKHPAIDSSSQRYAMNFSAD
AFVRQISRARTFGFMREIEYLQSKGLCLGGSLDCAIGLDDFRVLNEEGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAFKSGHALNNKLLQAVLAKQEAWEWATFEDEAELPVAFKAP
NLVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggacattaaaacgtattgttcaggcgactggcgtcggtttacatacc
ggcaaaaaagtcacactgacattacgccctgcgtcggctaacaccggggtcatctatcgt
cgcaccgacttgaatccaccggtagattttccggctgatgcaaaatacgtgcgcgacacc
atgctgagtacctgcctggtgaatgatgaaggcgtgcgtatttcaacggttgaacacctt
aatgccgccctggcgggtttgggtatcgataacattattgttgaagtcgatgcgccagaa
atcccgatcatggacggcagcgcagcaccgtttatctatctgctgatggatgcgggtatc
gagcagctcaacagcgcgaagaaatttgtgcgtgttaagcagaccgtgcgtgtggaagag
ggtgacaaatgggcagagatcaaaccgtacaacggtttctcgctcgatttcaccatcgac
ttcaaacacccggctatcgattccagctcacagcgctatgcgatgaacttctctgctgac
gcctttgttcgtcaaatcagccgggcgcgtacatttggctttatgcgtgaaatcgaatat
ctgcagtctaaaggcctgtgcctgggcggtagcttagattgtgcgataggtctggatgat
ttccgcgtactgaatgaagaaggtctgcgttttgaagacgagtttgtccgtcacaaaatg
ctggacgcgattggcgacttgtttatgtgtggtcataacattattggcgcattcactgcg
ttcaaatcgggccacgcgctgaacaacaagctgttgcaggcggttctggcgaagcaggaa
gcctgggaatgggcaaccttcgaagacgaagctgaactgccagtggcattcaaagcaccg
aatctggttctggcttaa
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