Polaromonas vacuolata: HC248_02052
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Entry
HC248_02052 CDS
T06542
Symbol
srpA_1
Name
(GenBank) Solvent efflux pump periplasmic linker SrpA
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pvac
Polaromonas vacuolata
Pathway
pvac01501
beta-Lactam resistance
pvac01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HC248_02052 (srpA_1)
01503 Cationic antimicrobial peptide (CAMP) resistance
HC248_02052 (srpA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvac03036
]
HC248_02052 (srpA_1)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvac02000
]
HC248_02052 (srpA_1)
01504 Antimicrobial resistance genes [BR:
pvac01504
]
HC248_02052 (srpA_1)
Chromosome and associated proteins [BR:
pvac03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HC248_02052 (srpA_1)
Transporters [BR:
pvac02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HC248_02052 (srpA_1)
Antimicrobial resistance genes [BR:
pvac01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HC248_02052 (srpA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
HH_MFP_RND
BSH_CzcB
BSH_CusB
HH_AAEA_pHBA
HH_EMRA
PS_Dcarbxylase
Motif
Other DBs
NCBI-ProteinID:
QJC56742
UniProt:
A0A6H2HA34
LinkDB
All DBs
Position
2210083..2210877
Genome browser
AA seq
264 aa
AA seq
DB search
MLQPQRHLLNTPFLCIFSPAQRSIYSSYLVTGSIDFKKMSHAWPHAKSTLLTMLCLSTLL
TACSGKSEAPAVKPPTEVGVVTMQPERQIVTNELPGRTSAFLTAEIRPQVGGIIEQRPFT
EGAQVKTGQLLYQLDNASYLAAQANAQALLTRSEAALSAAKRNANRNAELVKINAISQQL
ADDSQALMLLATSDLAVAKAALDSARINLAYTRIVAPINGRITTSSVTPGALVTANQSAR
HSLQCCNSIRCMSISPSPAPNYCN
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaccccaaaggcatcttttgaacacccctttcttatgcattttcagtcctgcg
cagcgcagtatttattcatcatatttagtgactggatctatcgactttaaaaaaatgagc
catgcttggccacacgcaaagtcaactttgttgaccatgctttgcctgagcacattacta
acggcatgctcaggcaagtctgaagcaccagccgtcaagccacccactgaagtcggtgta
gtgacgatgcagccagaacgccaaatcgtcaccaacgaattacccggacgaaccagcgct
tttctcactgccgagattcgcccgcaagtaggcggcatcatcgagcaacgtccgtttact
gaaggcgcccaggtcaaaaccggtcagttgttgtatcaactcgataacgccagctatctc
gctgcacaggctaatgcacaggccttgctgactcgctctgaggccgccttgagcgcagca
aaaagaaatgccaaccgcaatgcagagctagtcaagatcaatgcgattagccagcagttg
gcggatgatagccaagcactgatgttgctggccacttcagaccttgccgtggccaaggcg
gcgttagacagcgcgcgtattaatttggcctatacccgcatagtcgcgccaattaatggg
cgcataactacctctagcgtcacgccaggcgctttggtcacagcgaatcaatcggcgcgg
cactcactacagtgctgcaactcgatccgatgtatgtcgatatcacccagtccagcaccg
aactactgcaactaa
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