Polaromonas vacuolata: HC248_02423
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Entry
HC248_02423 CDS
T06542
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pvac
Polaromonas vacuolata
Pathway
pvac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HC248_02423 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvac03400
]
HC248_02423 (nth)
Enzymes [BR:
pvac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HC248_02423 (nth)
DNA repair and recombination proteins [BR:
pvac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HC248_02423 (nth)
Prokaryotic type
HC248_02423 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
HscB_4_cys
Motif
Other DBs
NCBI-ProteinID:
QJC57107
UniProt:
A0A6H2HBG5
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All DBs
Position
2616027..2616665
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AA seq
212 aa
AA seq
DB search
MNKVAINDFFATLKAANPMPVTELEYTSVFELLTAVLLSAQATDVSVNKATRKLFVVANT
PQKIFDLGLLGLESYIKTIGLYHSKAKHLLETCKMLIEQHGSVVPRLRQELEALPGVGRK
TANVVLNSAFGEATMAVDTHIFRVSNRTGLAVGKTPLAVELKLLKRIPKAYLIDAHHWMI
LHGRYVCMARQPRCWECGVANFCDYKAKTLQD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtagccattaacgacttttttgcgaccctcaaagccgccaaccctatgccg
gtcacggagcttgaatacaccagtgtgttcgagctgttgacggcggttttactctcagca
caagcgaccgatgtgagcgttaacaaagccacacgcaagttgtttgtcgtcgccaacacg
ccgcaaaaaatctttgacttaggtcttcttggcctagagagctacatcaagactattggt
ctttatcacagcaaagccaagcatttattagaaacttgcaagatgcttatcgagcaacat
ggcagtgtggttccaaggctcaggcaagagctagaagccctgccaggcgtgggccgcaag
accgccaacgtggtgctcaactctgcttttggtgaagccactatggcggtggacacgcat
atttttcgggtcagtaaccggactggcttggccgttggaaaaacaccgttagcggtcgag
ctcaaactgctaaaacgaatacctaaagcgtatttgattgacgcccaccactggatgatt
ctgcatggccgctatgtctgcatggcgcgccaacccagatgctgggaatgcggcgtagca
aacttttgcgactacaaagccaaaacacttcaagattaa
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