Planctellipticum variicoloris: SH412_000739
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Entry
SH412_000739 CDS
T09866
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar01501
beta-Lactam resistance
pvar01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SH412_000739
01503 Cationic antimicrobial peptide (CAMP) resistance
SH412_000739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_000739
01504 Antimicrobial resistance genes [BR:
pvar01504
]
SH412_000739
Transporters [BR:
pvar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SH412_000739
Antimicrobial resistance genes [BR:
pvar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SH412_000739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WLD10662
LinkDB
All DBs
Position
944771..947992
Genome browser
AA seq
1073 aa
AA seq
DB search
MQWLAEVCVKRPVLAIMIIMALVVSGIAAYPQLGVDRFPNMDLPTMYVRAVYPGASPEEV
ESEVTQILEDAIATVAGIDELRSISSEGSAIVIVTFTLNRELDAAVQDVRDAVGSVLNRL
PPEIDPPIVRKQDTDSSPILTLAVSGQRDSRELYLLADRFVKNVIESAPGVGQVTIVGAA
ERAVQVNVDSQRLAAYGLSIMQVRDALARQNAEVPGGRVDAGLRELNLRTLGRVEKARDF
DEIVVETVGGRRITLGDLGTVEDGQKEVRTLARLDGQPAVVLQVQRQSGTNTVEVIEGIK
QRLPRCRELLPKEVEVSVIQDQSRYIVAALHEIQGHLISGSLLASIVVLFFMGSWRSTLI
AAVAIPASVIATFAFMRAFDFTLNNVTMLALVLMVGVVIDDAIVVLENVFRFLEEHQMSP
RDAAIHGTREIGMAVLTTTISLVIVFLPVSFLSSVTGRMLFQFGITATVAILVSMLVSFT
LTPMMCSRLLRSTDRDPSHSPSSRRGLYGMMEGSYMWLLRWSLKFRWLVLLLCIGVIGLN
WPLYQMVSQDYIPTNVDESEFEVGVQAKEGATLSAMDATMQFVEGQIQSIDGVQHVLATV
GTRGFGGVNRGECYVRLSDIEGRTFSFGRLWAGLLKGNPGAAWEGNFTQQSKMQEIRSRL
RDLKDCRVSVRNLTSLRQGAPVDIDFSLTAANIQQLAEFSEKLREKVVEIPGIVDVDTTL
RLDKPEWRVHIDRERAASLGVDVREIADTLRIAVGGDDRVSRYRDISVDDAFDVELRLVG
LDRKDPQAISQLFVRGAGGAVSAGATAEGTALTRIDNVVEFEYGEAQARIDRLDRQRMVA
VRANIQQGYSLGDRISAVQAATAELGLPAGFGTRVMGRGRELERTLQDFGWTIVLSFVFM
YIVLAAQYEHLVHPITILLSLPLAVPFGLWSLYIGGESLNLYSALGILVLFGVVKKASIL
QIDHTNHLRQDKGMERTEAILQANRDRLRPILMTVISFVAGLLPLLLATGPGAEERRSIA
VVAVGGQTLSLLLTLLAIPVIYSILDDFGLLVVRREWCAKPATLPPERPATPA
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgcagtggctggccgaagtctgcgtcaaacgcccggtgctcgccatcatgattatcatg
gcgctggttgtgtcgggcatcgcggcctacccccagcttggcgtcgaccgctttccgaac
atggatctgccgaccatgtacgtgcgggcggtctatcccggcgcttcgcccgaggaagtg
gaatcggaagtcacgcaaatcctcgaagacgcaattgcgacggtcgcgggcatcgacgaa
ttgcgttcgatttcctccgaagggagcgcaattgtcatcgtcaccttcacgctgaaccgc
gagctggacgccgcggttcaggatgtgcgagatgctgttggcagcgtcctcaatcgtctc
ccccccgaaattgatcccccgatcgtccgcaaacaggacaccgactcctcgcccattctg
acgctggcggtctccggtcaacgcgacagccgcgagctgtatctgttggcggatcgtttc
gtcaagaacgtcatcgaatccgcgccgggagtcgggcaggtgacgatcgtcggcgccgcc
gaacgcgccgtgcaggtgaatgtcgactcgcagcggctcgccgcctacggactgtcgatc
atgcaggtccgggacgcgctcgcgcgacagaacgccgaagttcccggcggccgggtcgac
gcggggctccgcgaactcaatctccgcacgctcggtcgcgtcgaaaaagcccgcgatttc
gacgagattgtggtcgaaaccgtcggcggccggcggatcacgctcggcgacctggggacg
gtggaggacggccagaaagaagtccggacgctggcccggctcgacggtcagcccgccgtc
gtactgcaggttcagcggcaatccgggacgaacacggtcgaagtgatcgaggggatcaag
cagcggctgccgcgctgccgggagcttctgccgaaagaggtcgaagtctccgtcattcaa
gatcagtcccggtacatcgtcgccgccctccacgaaattcagggccatctgatctccggc
agtctgctggcgagcatcgtcgtcctgttcttcatgggctcgtggcggtcgacgctgatt
gcggccgtggcgattcccgcctcggtcatcgccactttcgccttcatgcgggcgttcgat
ttcacgctcaacaacgtcaccatgctcgcactggtgctgatggtcggcgtggtgatcgac
gacgccatcgtcgtcctggagaatgttttccgatttcttgaagagcatcagatgtcgccg
cgggatgccgccattcacggaacgcgcgaaatcggtatggcggtgctgacgacgacgatc
tcgctggtcatcgtttttctcccggtctcgttcctgtcgagcgtcaccgggagaatgctg
tttcagttcggcattacagcgacggtggcgatcctggtttcgatgctcgtcagcttcacg
ctgacgcccatgatgtgcagccggctgctgcgcagcacggaccgcgatccgtcgcactcc
ccatcttcccgccgcggcctgtacggaatgatggaaggcagttacatgtggctgctccgg
tggtccctgaaattccggtggctggtcctgttgctctgcatcggcgtcatcggtctcaac
tggccgctctaccagatggtcagccaggactatattccgaccaacgtggacgaatccgag
ttcgaagtcggcgtacaggccaaagaaggggccacgttgagcgcaatggacgccaccatg
cagttcgtcgaaggtcagatccagtcgatcgacggcgtccagcacgtcctggcaactgtg
gggacgcgcgggttcggcggcgttaaccgcggggaatgctacgttcgcctgtccgacatc
gaaggtcggacattctccttcgggcgattgtgggccgggctgctgaaagggaatccggga
gccgcctgggaaggcaacttcacccagcagtccaagatgcaggaaatccgcagccggctc
cgcgatctgaaggactgccgcgtctcggttcgcaacctgacctcgctccgccagggagcg
ccggtcgacatcgacttctcgctgaccgcggccaatattcaacagctcgccgagttctcc
gaaaaactgcgggaaaaagtcgtcgagatccccgggatcgtcgacgtcgacaccactctg
cggctcgacaaacccgaatggcgggtgcatatcgaccgcgaacgggcggcgtcgctgggc
gtcgacgttcgcgaaattgccgatacgctgcgaatcgccgtcggcggcgacgatcgggtc
tcccgctatcgcgacatatccgtcgacgacgcctttgacgtcgaattgcgactcgtcggc
ctcgaccgcaaagatccgcaggccatttctcaattatttgtccgcggcgccggcggcgcg
gtctcggccggcgccaccgctgaagggacggcgctgacccgcatcgacaacgtcgtggaa
ttcgagtacggggaagcccaggctcggatcgaccgcctggatcgccagcggatggtcgcc
gtccgggccaacatccagcagggctattctctcggcgatcgcatctcggccgtccaggcg
gcgactgccgaactgggactgccggcgggattcggcacccgcgtcatgggacgcggacgc
gagctcgaacgaactctccaggacttcggctggaccatcgtcctgtcgttcgtcttcatg
tacatcgtcctggcggcccagtacgagcatctcgtgcatccgatcacgattctgctgtcg
ctcccgctggccgtgccattcggactctggagtctttacatcggcggcgaatcgctcaat
ctgtactcggccctcggcatcctggtgctgttcggcgtcgtgaagaaagcttcgattctg
cagatcgatcacacgaaccacctgcggcaggacaagggaatggagcggaccgaggcgatc
ctgcaggcgaaccgcgaccggcttcgacccattctgatgaccgtcatctcgttcgtcgcc
ggcctgctgccgctgttgctggcgacggggccgggggcggaagaacgacggtcaatcgcg
gtcgtcgccgtcggcgggcagactctgtcgctcctgctgaccctcctggccattccggtg
atctactcgatcctcgatgacttcggactcctggtcgtacgacgcgaatggtgcgccaag
ccggcgactctgccaccggaacgaccggctacacccgcatag
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