Planctellipticum variicoloris: SH412_003531
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Entry
SH412_003531 CDS
T09866
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar01501
beta-Lactam resistance
pvar01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SH412_003531
01503 Cationic antimicrobial peptide (CAMP) resistance
SH412_003531
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_003531
01504 Antimicrobial resistance genes [BR:
pvar01504
]
SH412_003531
Transporters [BR:
pvar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SH412_003531
Antimicrobial resistance genes [BR:
pvar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SH412_003531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
WLD13366
LinkDB
All DBs
Position
complement(4546492..4549698)
Genome browser
AA seq
1068 aa
AA seq
DB search
MISNFFIERPIFANVIAIVTMLVGIVSLQALPIEQYPEITPPTVQVAAVYPGANAEVLSD
TVAGPIEQEINGVEDMLYMSSTCSSNGSYTLTVTFEVGTDLDEAQVLVQNRVAVAMPRLP
QEVQRQGVTTKKQSTNITLVASLISPDGRYDDLYLSNFATLRVKDALTRVEGVGDVQVIG
GGTYGMRIWVNPDAMKARNLTMEDVLAAIREQNVQVAAGQVGQAPTPREQGFQFNVSVQG
RLSDPAQFGDIIIKTVSDDRSGMRVTRVKDVARVELGAQTYDQWCEIAGQPAASLLVYQL
PGANALQVAENVKHAMHELERNFPEGIEAIIPFDTTIFVEESIYEVYKTLLEAGVLVLIV
ILVFLQDWRATLIPATTVPVTIIGAFAAMAALGFSINMLTLFGLVLAIGIVVDDAIVIVE
NAVHHIDHGGLDPKRATIKAMGEVIGPVMGITLVLMAVFLPTAFLGGITGQLYRQFALTI
AATAVISALNAVTLKPAQCAVYLRPTPTRKNFFYRGFNRVYGWFEGIYTAIVTVAVRQTA
LVMVLFLGLVGLTGWWFVKLPTGFVPTEDQGYAIVAIQLPDAASQERTREVTRRVNAILK
ETPGVRSWFLLGGMSLLDSSVTSNAATMFLTFTPFDERAHHPELSQEAILGGLMGKFQSV
REAMILAFPPPGIRGLGVAGGFEMKIEDRGGVGLNELQKVVTTMVESAAGQTSLARVQST
FRAGVPQIYVDIDRVKAKSLGVPLDSIFGTMQAALGSAYVNDFNKFGKTYQVRVQADQPF
RLQPEDIRRLEVRNRDGQMIPLGTLATIRKTLGPQIVPRYNLYPSATINGSAAPGVSSGQ
ALLLMEQMAATELPQSMGYEWTGMSFQEKRVGSQAVYVFALGVLMVYLVLAAQYESWLMP
AAVIMVVPLALLGTVIAVSVRGMDNNIYTQIGIVLIIALASKNAILIVEFARELRAHGRS
INEAAIEASRLRFRPILMTSFAFILGIVPLINATGAGAASRRALGTAVFGGMIAATVLAV
FFVPVFYVLMQRLAEFGRKKPEGHLSSQPNAEPAMTAIHAAEDPAVVA
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgatctcgaatttcttcatcgaacgtccgatcttcgcgaatgtcatcgcgatcgtcaca
atgctcgtcggcatcgtatccctgcaggcgctgcccatcgaacagtacccggagattacg
ccccccaccgtgcaggtggcggcggtctatcccggggcgaacgccgaagtgctgtcggac
acggtcgccggtccgatcgagcaggagatcaacggcgtcgaggacatgctctacatgtct
tcgacctgctcgagcaacggctcgtacactctgacggtgacgttcgaggtcggaaccgac
ctcgacgaggcgcaggtgctggtgcagaaccgcgtagccgtggcgatgccgcgcctgccg
caggaagtccagcggcagggggtgaccaccaagaaacagtcgaccaacatcacgctggtt
gcctcgctgatttcgcccgacggacgctacgacgatctctacctcagcaactttgcgacg
ctgcgggtcaaagacgccctgacgcgcgtcgaaggcgtcggcgacgtccaggtgatcggc
ggcggaacgtacgggatgcggatctgggtcaacccggacgccatgaaagcgcggaacctc
acgatggaggacgtgctggccgcgatccgcgagcagaacgtgcaggtcgccgcgggacag
gtcggccaggcccccaccccccgcgaacaggggtttcagttcaacgtgtcggtgcagggg
aggctcagcgatcccgcgcagttcggcgacatcatcatcaagacggtcagcgatgaccgg
tccggcatgcgagtgacgcgcgtcaaggacgtcgcccgcgtggaactgggggcgcagacc
tacgaccagtggtgcgaaatcgccggccagccggcggccagcctcctggtttatcagttg
cccggcgccaacgctctccaggtggcggagaacgtcaaacacgccatgcacgaactcgaa
cggaacttccccgaggggatcgaggcgatcattcccttcgatacgacgatcttcgtggaa
gagtcgatctacgaggtctataagacgctgctggaagccggtgtcctcgtgctgatcgtc
attctggtctttctgcaggactggcgggcgacgctgattccggcgacgaccgttcccgtc
acaatcatcggggcgttcgccgcgatggccgccctgggcttctcgatcaatatgctgacc
ctgttcggtctggtgctggcgatcggcattgttgtcgacgatgccatcgtcatcgtcgaa
aacgcagtgcaccacattgaccacggggggctcgatccgaagcgggccacgatcaaggcg
atgggcgaagtcatcggcccggtgatgggcatcacgctggtgctgatggcggtgttcctg
cccaccgcgttcctgggcggcatcaccggccagctctatcggcagttcgcgctgacgatc
gctgccactgctgtcatcagcgccctgaacgccgtgacgctcaagcccgcccagtgcgca
gtctacttgcgcccgactccgaccaggaagaatttcttctatcgtggcttcaaccgggtc
tacggctggtttgaagggatctatacggcgattgtcacggtcgccgttcgacagaccgcc
ctggtgatggtgttgttcctcgggctggtggggctgaccggctggtggttcgtcaagttg
ccgacgggcttcgtgccgaccgaggatcagggctacgcaatcgtcgcgattcagttgccc
gatgcggcgtctcaggagcggacgcgggaagtcacccgcagggtcaacgccattctcaag
gaaaccccgggcgttcgttcgtggtttcttctcggcggaatgtcgttgctcgattcttcc
gtcacctccaacgccgccacaatgttcctcacctttactccctttgatgagcgggcgcac
catcccgagctgagccaggaggccatccttgggggactgatgggcaagtttcaatcggtc
cgcgaagcaatgattctggcgttccccccgcccggaattcgagggctgggagttgcgggc
ggcttcgaaatgaagatcgaagaccgtggcggcgtcggcctgaacgaactgcagaaggtc
gtcacaacgatggtcgaatccgccgccggacagaccagtctcgcgcgagtccagtcgacg
tttcgcgccggggtgccgcagatctacgtcgacatcgatcgcgtgaaggccaaaagtctg
ggggtgccgctcgattcgatcttcggcaccatgcaggcggctctcggctcggcctatgtg
aacgacttcaacaagttcggcaaaacctaccaggtgcgcgttcaggccgatcagccgttc
cggctgcagcccgaggacatccggaggctggaggtgcgcaatcgcgacggccagatgatc
ccgctcggaacactcgcgaccattcgcaagacgctcgggccgcagatcgtcccgcggtat
aacctctatccgtcggcgaccatcaacggttccgccgccccgggcgtcagttccggccag
gcgctgctgctgatggagcagatggccgcgaccgaattgccgcagtcgatgggctacgag
tggaccggcatgtcgttccaggagaagcgggtcggctcgcaggccgtctatgtcttcgcg
ctcggcgtactgatggtttacctggttctggccgcccagtacgagagctggctgatgccg
gccgccgtgatcatggtggtgccattggccctgctggggacggtcattgccgtctcggtg
cgaggcatggacaacaacatctacacgcagatcggcatcgtgctgatcatcgccctcgcc
agcaagaacgctattctgatcgtcgagttcgcccgagaactgcgggctcacggacgttcg
atcaacgaggcggcgatcgaggcctcccggctgcgattccgtccgattctgatgacgtcg
ttcgcattcatcctcggaatcgtgccgttgatcaacgcgacgggcgccggagcggccagc
cgtcgggctctagggacggcggtattcggcggcatgatcgcagcgacggtcctggccgta
tttttcgtgcctgtgttctacgtcctgatgcagcgacttgcggagttcgggcggaagaag
ccggaaggtcatctctcaagccagcccaacgctgagcctgccatgaccgccatccacgcc
gcagaagaccccgctgtcgtcgcatga
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