Planctellipticum variicoloris: SH412_003669
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Entry
SH412_003669 CDS
T09866
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pvar
Planctellipticum variicoloris
Pathway
pvar01501
beta-Lactam resistance
pvar01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pvar00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SH412_003669
01503 Cationic antimicrobial peptide (CAMP) resistance
SH412_003669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvar03036
]
SH412_003669
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvar02000
]
SH412_003669
01504 Antimicrobial resistance genes [BR:
pvar01504
]
SH412_003669
Chromosome and associated proteins [BR:
pvar03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
SH412_003669
Transporters [BR:
pvar02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
SH412_003669
Antimicrobial resistance genes [BR:
pvar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SH412_003669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
WLD13498
LinkDB
All DBs
Position
4719238..4720404
Genome browser
AA seq
388 aa
AA seq
DB search
MKISAIPFIFLALMLPSLSGCMSEAASHEQSHEDSHSESDSEEGAEHHAHKIVVTSPVKQ
DVINTQPYVCQIHSCKHIEVRALKGGYLQEICVKEGQAVKKGDLMFQILPTLYQAELDSE
IAEAQRLQIALNNAITLNQKGIVSPQEIALKKAELAKAQAKVQLAQAELNFTSVQAPFDG
IVDRQHNQLGSLIEEGDVLTTFSDNSLMWVYFNVPEARYLEYKAELKADGADDDGNDKRL
QIELRLADGQIFPHKGKIGAIEADFNNVTGNIPFRADFSNPEGLLRNGQTGTILIRRHMK
DVFVIPQRATFEILDKRYVYVVDDDHVVHQRDITTQSEQDDIFIIEDGLHENDKIIFEGI
RQVRDGEKIEYEFLAPEDILGNQKHHAE
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaagatctcagcgattccattcattttcctggcgctgatgctcccctccctgtccggc
tgcatgtcggaggccgcttcgcacgaacagtcgcacgaagactcccactccgaatccgat
tccgaagagggcgccgagcaccacgctcataaaatcgtggtcaccagccccgtcaaacag
gacgtgatcaacactcaaccctacgtctgccagatccactcctgcaagcacatcgaagtc
cgcgccctcaaagggggatatctgcaggagatctgcgtcaaggaaggacaggcggtcaag
aagggagatctgatgttccagatcctcccgacgctctaccaggccgagctcgactccgaa
atcgccgaagcccagcggctccagatcgccctcaacaacgccatcaccttgaaccagaag
gggatcgtctccccccaggaaatcgcccttaaaaaggccgaactggccaaggcccaggcc
aaggtgcagttggcgcaggccgagttgaacttcaccagcgtccaggccccgttcgacggc
atcgtcgaccgccagcacaaccagttgggaagcctcatcgaagagggcgacgtcctcacc
acgttctccgacaacagcctcatgtgggtctacttcaacgtccccgaagctcgctatctc
gagtacaaggccgaactgaaagcggacggagcagacgacgacggaaacgacaaacgcctg
cagatcgaactccgactggccgacggccagattttccctcacaaaggcaagatcggcgcc
atcgaagccgatttcaacaacgtgaccggaaacattcccttccgcgccgacttctccaac
cccgagggcctgctgcgcaatggccagaccggcaccattctgatccgccgccacatgaag
gacgtcttcgtcattcctcagcgggccaccttcgagattctcgataaacgctacgtttac
gtcgtcgacgacgatcacgtcgtgcaccagcgcgacatcacgactcagagcgagcaggac
gacatcttcatcatcgaagacggcctgcacgagaacgacaaaatcatcttcgaaggcatt
cgccaggttcgcgacggcgaaaagatcgaatacgaattcctcgcccccgaagacatcctc
ggcaaccagaagcatcacgcggaatag
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