Pseudoalteromonas viridis: J5X90_09980
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Entry
J5X90_09980 CDS
T07232
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J5X90_09980 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvb03400
]
J5X90_09980 (nth)
Enzymes [BR:
pvb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J5X90_09980 (nth)
DNA repair and recombination proteins [BR:
pvb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J5X90_09980 (nth)
Prokaryotic type
J5X90_09980 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Translat_reg
HHH_8
SdiA-regulated
Motif
Other DBs
NCBI-ProteinID:
QTL33921
LinkDB
All DBs
Position
1:complement(2280607..2281242)
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AA seq
211 aa
AA seq
DB search
MNKAKRLEILTRLRDDNPNPETELEYTSPFELLVAVTLSAQATDVSVNKATRKLFPVANT
PQAIIELGVDGLRDYIKTIGLFNSKANNVYKMCHILMEQHGGEVPENREALEALPGVGRK
TANVVLNCAFGWPTIAVDTHIFRVSNRTKFAMGKDVVAVEEKLEKVVPKEFKVDVHHWLI
LLGRYVCTARKPKCGSCIIEDLCEFKEKTSG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcaaaacgactcgaaattctcacccgtttgcgggatgacaaccccaacccg
gagactgaactggaatacacctcaccgtttgagctgctggtcgccgtcactttatcagcc
caggccacagacgtgagcgtcaataaagccacccgtaagctgtttccggttgccaatacc
ccgcaggccattatcgagctgggcgtggatggcctcagagactacatcaaaaccattggc
ttatttaactccaaagccaacaacgtctacaaaatgtgccacattttgatggagcagcat
ggcggcgaagtgccagaaaatcgcgaagcgctcgaagccctgcccggcgtgggccgcaag
actgccaacgtggtgctcaattgtgccttcggctggcccactatcgccgtagacacccac
attttccgtgtatcaaaccgcaccaaatttgccatgggcaaagatgtggtggcggttgaa
gagaagctcgaaaaggtggtccccaaagagtttaaagtagacgtacatcactggctgatt
ttactcggtcgctacgtatgtaccgcacgcaagcctaaatgtggtagctgtattattgaa
gacttatgtgagttcaaagaaaaaacctctggctaa
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