Pseudoalteromonas viridis: J5X90_16610
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Entry
J5X90_16610 CDS
T07232
Name
(GenBank) efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
pvb
Pseudoalteromonas viridis
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvb02000
]
J5X90_16610
01504 Antimicrobial resistance genes [BR:
pvb01504
]
J5X90_16610
Transporters [BR:
pvb02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
J5X90_16610
Antimicrobial resistance genes [BR:
pvb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
J5X90_16610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QTL35128
LinkDB
All DBs
Position
1:complement(3789086..3792262)
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AA seq
1058 aa
AA seq
DB search
MNFSHFFISRPIFAAMLSLVFVITGAISLFQLPVSEYPEVVPPTVVVNASYPGANPKVIG
QTVATPLEQELNGLENMLYHSSQATSDGRLTLTVTFALGTDLDQAQVQVQNRVNNALPRL
PQEVQRLGVTAQKSSPNLALVVHLVSPDGQQDTSYMANYADIYIKDELKRLPEVGDLQLF
GGAKYSMRVWLNPDALAARNLTAGDVINALRAQNQQVAAGSLGAQPSPDENQFQVLLNVK
GRLTQIDEFEQVIIKVGEQGQITRLQDIARVELGQENYALRAMLDNQPALAMPVFQRPGS
NAIALSDNVRATMARLAKDFPAGMTYEIAYDPTVFVRGSIDAVIQTLLEAILLVVVVVVV
FLQTWRASIIPLIAVPVSLIGTFAIMQMLGVSINTLSLFGLVLAIGIVVDDAIVVVENVE
RNIADGYSPFEATKIAMTEVTGPIIAIAFVLCAVFIPTAFITGLSGQFYKQFALTITIST
LISAFNSLTLSPALSALLLKSHDAPKDGLTRVLDKLFGTWLFKPFNRMFDKGAQGYEKLV
QKLIRMSVVVGVVYLALVGSTVGLFNSVPGGFIPQQDKQYLVAVAQLPDAASLDRTEAVV
KQMQAIALEVPGVAHTVAFPGLSVNGFTNSTNSGIVFTPLADFSERQDPSLSAHAIAMQL
NMRFAEIDEAFVAVFPPPPILGLGTTGGFKLQLQDRGNKGFEALFAALQNTIGQAQQHPA
LTGLYSSFRIQVPQMDINVDREQALLQGIPLDEVFNALQIYLGSVYVNDFNLFGRTYQVK
AQADAEFRAKQSQINNLKVRNAAGNMVPLGSVVTVTPTTGPDRVMHYNGYMTAELNGSPA
PGYSSDQAKEAIESVLAESLPEGISYEWTEVTYQQILAGNTMVYVFPLVVVLVFMVLAAQ
YESLRLPLAIILIVPMTIFSALAGVYMLGGDNNIFTQIALIVLVALASKNAILMVEFARD
KHKSGATHLEAIMEACRLRLRTILMTSIAFTAGVVPLVLASGAGAEMRQAMGNAVFFGMI
GVTVFGLLFTPVFYRLLTLNDSAKEGLQDNANEPVIEK
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttctcacttttttatcagcaggccgatttttgcggccatgctctcgctggtg
tttgtgatcaccggtgccatctcgctgtttcagttgccagtcagcgaatacccggaagtg
gtgccgcctacagtagtggttaacgccagttacccgggggcgaaccccaaagtaatcggt
cagaccgtcgcaacgccgcttgagcaggagctcaatggcctggaaaacatgctgtaccat
tcatcgcaggcaaccagcgatggtcgtcttaccctgactgtgacctttgctttgggcaca
gacttggatcaggcccaggttcaggtgcaaaaccgggtgaacaatgccttgccacgcctt
cctcaggaagtacaacgcctgggtgtgacggcacaaaaatcgtcgcctaacctggcgctg
gtggtgcatttggtgtctccggatggtcagcaggatacctcttacatggccaactatgcc
gacatttacattaaagatgagctgaagcgtttgccggaagtgggcgatttgcaactgttt
ggtggtgccaaatactctatgcgtgtgtggctaaatcccgatgcactggcagcgcgtaat
ttgactgcaggtgatgtgatcaatgctctacgtgcacaaaaccagcaggtggccgcaggc
tctttgggtgctcaaccttcaccggatgagaaccagtttcaggtattgttgaatgtaaaa
gggcgcttaactcagattgatgaatttgagcaggtgatcatcaaagtgggtgagcagggc
cagatcacacgcttgcaggatattgcgcgtgttgaactgggccaggaaaactatgcgctg
cgcgccatgctggataaccagcctgcgctggcgatgccggtattccagcgtccgggctct
aatgccattgctttgtctgacaacgtacgtgcgacaatggcgcgtctggcgaaagacttc
ccggcgggcatgacctatgaaattgcttatgacccgaccgtattcgtacgtggctcaatt
gacgccgttatccagacgttactggaagccattttgctggtagttgtggttgtggtggtg
ttcctgcaaacctggcgcgcgtctatcattcctttaattgccgtgccggtgtcactgatt
ggtacttttgccatcatgcagatgctgggcgtgtcgattaatacactgtctttgtttggt
ctggtactggccattggtattgtggtggacgacgccattgtggtggtcgaaaacgtagaa
cgtaatattgctgacggttatagcccgtttgaggcaactaaaattgccatgaccgaggta
accggtccgattattgccattgcctttgtattgtgtgcggtgtttattccaacggccttt
attaccggactgtcgggccagttttataagcaatttgccctgacgatcaccatttcaact
ttgatctcggcttttaactcgctgaccttgtcgcctgcgctttctgccttgctgttaaag
tcgcatgatgcgccgaaagatggcctgacccgcgtgctcgacaaactgtttggcacctgg
ttattcaaacccttcaaccgcatgttcgacaaaggtgcgcagggttacgagaagctggta
caaaaactgatccgcatgagtgtggttgtgggtgtggtgtacttagcgctggtgggttca
accgttggcctgtttaactcagtgccgggtggctttattccgcagcaggataagcaatac
ctggttgcggtagcgcaactaccggatgcggccagtctggacagaaccgaagccgtggtc
aaacaaatgcaggcgattgcgctggaagtacctggtgtggcacacaccgtggcgttcccg
ggcttgtcggtgaatgggtttaccaacagtaccaacagcggcattgtgtttacgccactg
gctgatttctctgagcgtcaggatcccagcctgtctgcccatgcgattgcgatgcagctg
aatatgcgttttgctgaaattgatgaagcctttgttgctgtgttcccgccgccgccaatt
cttggtctgggcaccacaggtggctttaaattacagcttcaggacagaggaaacaaagga
ttcgaagccttgtttgcagcactgcagaataccattggtcaggcacagcaacatccggct
ctgacgggtttgtactccagcttccgtattcaggtgccacaaatggacattaacgttgac
cgtgagcaggcactattgcagggtatcccgctggatgaagtgttcaatgcactacagatt
tacctgggctctgtgtatgtgaatgactttaacctgtttggccgtacttatcaggtcaaa
gcgcaggccgatgcagagtttcgtgctaagcaatcgcagatcaacaacctgaaagtgcgt
aacgccgccggcaatatggtaccgctgggctccgtagttacggtgacacccaccacaggt
ccggatcgggtgatgcactataacggctatatgaccgcagaactgaacggcagcccggcg
ccggggtacagctcagatcaggccaaagaagcgattgaatctgtactggccgagagttta
ccggaagggatcagctatgaatggactgaggtaacctatcagcaaattctggcgggcaat
accatggtgtatgtgttccctctggtagtggtactggtctttatggtgctggcagcccaa
tacgagagcctgcgtttaccactggccattatattgatagtgccaatgacgatattctct
gcgctggcgggcgtgtacatgctgggcggcgacaataatatcttcacccagattgcgctg
attgtactggtggcactggcctcgaagaatgcgattttgatggtcgagtttgcccgcgat
aagcataaatccggtgcaacgcacctggaagccatcatggaagcgtgtcgtttacgactg
cgtactatcctgatgacctcgattgcgttcacagccggtgtggtccctctggtactggca
tcaggcgcgggtgcagagatgcgccaggcaatgggtaatgcggtgttctttggtatgatt
ggggtaacggtatttggcttgctattcacgccggtgttctatcgcctgcttaccctgaac
gacagcgcgaaggaaggtttgcaagacaacgcaaatgagcctgtgattgaaaaatag
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