Prevotella veroralis: J5A55_04005
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Entry
J5A55_04005 CDS
T08190
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pvf
Prevotella veroralis
Pathway
pvf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J5A55_04005 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvf03400
]
J5A55_04005 (nth)
Enzymes [BR:
pvf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
J5A55_04005 (nth)
DNA repair and recombination proteins [BR:
pvf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J5A55_04005 (nth)
Prokaryotic type
J5A55_04005 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_8
Spc7
HHH_5
DUF6083
Motif
Other DBs
NCBI-ProteinID:
QUB41421
LinkDB
All DBs
Position
1:complement(956408..957055)
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AA seq
215 aa
AA seq
DB search
MTRKERYTYILDYFRKHVGHVTTELNFGSAFQLLCATLLSAQCTDKRINAITPELFRHYP
DAKTMAKASVEDVFEYVKSVSYPNSKATHLVEMSRMLVEKFKGEVPSTPEELTQLPGVGR
KTANVIQAVWFGKPTLAVDTHVYRVSHRLGLVPSTANTPRKVEDYLMNNIPTEEVSDAHH
WILLHGRYVCKSAKADCEHCPFDTICPKLMKDSKL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaaaagaacgatatacttatattttggattacttccgcaagcatgtgggacat
gtgacaactgaacttaactttggctctgcgtttcagttgctttgtgctacattgctttct
gcccaatgtacagataaaaggattaatgcgattacgccagaattattccgacattatcca
gatgctaagacgatggctaaggcaagtgttgaagatgtctttgaatatgttaagagtgtt
tcttatcctaattcaaaggcaacgcatttggtagagatgtcaaggatgttggtagagaag
tttaagggggaagttccttctactccagaagagcttacacagttaccaggtgttggacgc
aaaactgccaatgtgatacaagctgtttggtttggaaagccaaccttagctgtagatacg
catgtttatcgtgttagtcatcgtttgggcttagtaccatcaacagcaaatacaccacgt
aaagttgaggattatctgatgaataatatccctacggaagaggtttctgatgcacatcat
tggatattacttcatgggcgttatgtttgtaagagtgctaaggcggattgtgaacattgt
ccttttgatacgatatgtccaaagttgatgaaggatagtaagttataa
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