Proteus vulgaris: CRN77_09705
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Entry
CRN77_09705 CDS
T05486
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
pvg
Proteus vulgaris
Pathway
pvg03030
DNA replication
pvg03410
Base excision repair
pvg03420
Nucleotide excision repair
pvg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CRN77_09705 (ligA)
03410 Base excision repair
CRN77_09705 (ligA)
03420 Nucleotide excision repair
CRN77_09705 (ligA)
03430 Mismatch repair
CRN77_09705 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvg03032
]
CRN77_09705 (ligA)
03400 DNA repair and recombination proteins [BR:
pvg03400
]
CRN77_09705 (ligA)
Enzymes [BR:
pvg01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
CRN77_09705 (ligA)
DNA replication proteins [BR:
pvg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CRN77_09705 (ligA)
DNA repair and recombination proteins [BR:
pvg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
CRN77_09705 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CRN77_09705 (ligA)
MMR (mismatch excision repair)
DNA ligase
CRN77_09705 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CRN77_09705 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
Nlig-Ia
DNA_ligase_ZBD
PTCB-BRCT
HHH
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ATM99990
LinkDB
All DBs
Position
2194195..2196222
Genome browser
AA seq
675 aa
AA seq
DB search
MNKNTQQKIDKLRVTLRHHEYLYHVMDAPEIPDAEYDRLMNELKALEAEHPELITSDSPT
QRVGALPLTAFEQVRHEIPMLSLDNAFDETSYLAFDKRLRDRLKNSEEITFCCELKLDGL
AVSLLYENGVLVQAATRGDGTTGENITENVRTIKAIPLRLYGEDIPARIEIRGEVFMNEK
GFEYLNEEARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGELPTSH
YERLQQFKKWGLPVSDAVKLCTGSKAVLDFYHHVEEIRSNLGFDIDGVVIKVDDIALQEE
LGFVSRAPRWAIAYKFQAQEQMTIIKDVEFQVGRTGAITPVARLEPVQVAGVVVSNATLH
NADEIERLGIRIGDTVVIRRAGDVIPQVVSVIEEKRPNDAQEIIFPTHCPICDSDVERIE
GEAVARCTGGLICGAQRKEALKHFVSRRAMDVDGMGDKIIDQLVEKEYVKTPADLFRLDE
KILSGLERMGEKSAKKLITALDKAKSTSFARFIYALGIREVGEATASGLTTHFSTLDALR
NADVEALKSVPDVGDVVAKHVVNFFQEEHNRTVIDQLINDAGITWQAPVIVTHEEGDNPF
AGKTVVLTGSLSQLTRDEAKDRLAALGAKVSGSVSKKTDMVIAGEAAGSKLVKANELGIT
VIDEDEMIRLLDQSK
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaacactcaacaaaaaattgataaacttcgcgttactctacgtcaccatgaa
tatctctatcatgtcatggacgcacctgaaatacctgatgctgaatacgatcgcttaatg
aatgagctaaaagcattagaagctgaacaccctgaattaattacttctgattcgccaaca
cagcgggtcggcgccttgcctctgacagcatttgagcaagtgagacatgaaattccgatg
ctctctttagataatgcttttgatgaaacaagctatctagcttttgataagcgtttgcgt
gatcgtttaaaaaatagtgaagagatcactttctgctgtgaattaaaattagatggattg
gcagtcagtttactttatgaaaatggagtattagtacaagctgcaacgcgtggtgacggt
acaacaggggaaaatatcactgagaatgtgagaacaattaaggccattccactgcgttta
tacggtgaagatatccctgctcgcattgaaattcgtggcgaagtttttatgaatgaaaaa
ggctttgaatatttaaacgaggaggcgcgacgtacaggcggaaaagtttttgctaaccct
cgtaatgccgcagctggctcattaagacagctcgatcctcgtattacagcaaaacggcca
ttaacctttttctgttatggcgttggtgtactcgaaggaggtgaattaccaacaagccac
tatgagcgcctacaacaatttaaaaaatggggattacccgttagcgatgctgtaaaactt
tgcacaggtagtaaagcagtccttgatttttatcaccatgtagaagaaattcgctctaat
ttaggttttgatattgatggtgttgttatcaaagttgatgatattgcactgcaagaagaa
ctgggttttgtatcaagagcaccacgttgggctattgcttataaattccaagctcaagaa
caaatgacgattatcaaagatgttgaattccaagtagggcgtactggtgctattacacct
gttgcacgtttagagcctgttcaagtagcgggtgtggttgtgagtaatgcaacgttacac
aatgctgatgaaattgaacgcttagggatacgcattggcgataccgtagttattcgtcga
gccggtgatgttattccccaggttgtcagtgtgattgaagaaaaacgtcccaatgatgct
caagaaattatctttccgacacattgccctatttgtgattctgatgttgagcgcattgaa
ggtgaagctgttgcacgttgtactggtggtttaatttgtggcgcacaacgtaaagaagca
cttaaacattttgtttcacgtcgagccatggatgtggatggaatgggtgataaaattatt
gatcaactggttgagaaagaatatgtcaaaacgccagctgaccttttccgtttagatgaa
aaaattctgtctggtttagagcgaatgggcgagaaatcagctaaaaaattaatcacagct
ttagataaggctaaatcaacgtcatttgcacgttttatttatgcactgggtattcgagaa
gtcggtgaagcaacagcaagtggattaacaacacatttctcaacgcttgatgcattacga
aatgcagatgttgaagcactaaaatccgttcctgatgtgggcgatgttgtggctaagcat
gtcgttaatttcttccaagaagaacacaatagaacggttattgatcaattgatcaatgat
gccggtattacatggcaagcgcctgttattgtgactcatgaagagggtgataatcctttt
gcgggtaaaactgttgtgttaactggatcactttcacaattaacgcgtgatgaagcaaaa
gacagattagctgcattaggtgcaaaagtgagcggaagtgtttctaaaaaaaccgatatg
gtgattgctggtgaagctgcaggctctaagttagtgaaagctaacgaattagggataacc
gttatcgatgaagatgaaatgatacgattacttgatcaatcgaaataa
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