Panicum virgatum (switchgrass): 120640747
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Entry
120640747 CDS
T07260
Name
(RefSeq) 2-oxoglutarate dehydrogenase, mitochondrial-like
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00785
Lipoic acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120640747
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
120640747
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
120640747
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
120640747
NCBI-ProteinID:
XP_039772601
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All DBs
Position
7K:28368443..28375162
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AA seq
1023 aa
AA seq
DB search
MGLFRAASGLARVALRRNLARATASPFAGGAAPGAAPARYFHSTRPRRFAAPAPRAVPLS
RLTDSFLDGTSSVYLEELQRAWEADPNSVDESWDNFFRNFVGQAATTSPGLSGQTIQESM
RLLLLVRAYQVSGHLKAKLDPLGLEERPVPDVLDPAFYEFSEADLDREFFLGVWRMAGFL
SDNRPVQTLRSVLERLEQAYCGTIGYEYMHIADREKCNWLREKIETVNPREYTYDRRQVM
LDRLIWSTQFENFLATKWTTAKRFGLEGAETLIPGMKEMFDRAADLGVESIVIGMPHRGR
LNVLGNVVRKPLRQIFSEFSGGTKPVNEGEGLYTGTGDVKYHLGTSYDRPTRGGKHIHLS
LVANPSHLEAVDPVVAGKTRAKQYYSNDRDRTKNLGVLLHGDGSFSGQGVVYETLHLSAL
ENYTTGGTIHIVVNNQVAFTTDPKSGRSSQYCTDVAKALDAPIFHVNGDDLEAVVHVCEL
AAEWRQTFHSDVVVDIVCYRRFGHNEIDEPSFTQPKMYKVIRNHPSALEIYQNKLLESGK
ISKEDIDRLNKKVNTILNEEFKNSKDYVPNKRDWLSAYWTGFKSPEQISRIRNTGVKPEI
LKRVGEAMTTLPENFKPHRAVKKIFDQRRQMIETGEGIDWAVGEALAFATLIVEGNHVRL
SGQDVERGTFSHRHSVIHDQETGERYCPLDNLVMNQDEELFTVSNSSLSEFAVLGFELGY
SMENPNSLVLWEAQFGDFANGAQVIFDQFLSSGESKWLRQTGLVVCLPHGYDGQGPEHSS
ARLERFLQMSDDNPYVIPEMDSTLRKQIQQCNWQVVNVTTPANYFHVLRRQIHRDFRKPL
IVMSPKNLLRHKDCKSNLSEFDDLAGHPGFDKQGTRFKRLIKDQNNHKDLEEGINRLVLC
SGKVYYELDEERRKTERTDVAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGA
YSYINPRLLTAMKALGRGSIDDIKYVGRAPSAATATGFYSVHVQEQTELVQKALQRDPIN
YLF
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggggctgttccgggcggcgtccggcctggcccgggtggcgctgcggcggaacctcgcg
cgcgccacggcgagccccttcgcgggcggcgcggcccccggcgccgcgcccgcgcgctac
ttccactccacgcgcccgcgcaggttcgccgcgcccgcgccccgcgcggtgccgctctcg
cgcctcaccgacagcttcctcgacgggaccagcagcgtctacctcgaggagctgcagcgg
gcctgggaggccgaccccaactcggtcgacgagtcgtgggacaacttcttccgcaacttc
gtcggccaggcggccaccacctcgcccggcctctccgggcagaccatccaggagagcatg
aggctgctgctgctcgtcagggcgtaccaggtgagcggacacttgaaggccaagctcgac
ccgctggggctggaggagcgcccggtcccggacgtgctggacccggcattctatgagttc
tctgaagcggatttggaccgtgagttcttcctgggagtgtggaggatggcggggttcctg
tccgacaaccggcctgtgcagacgctgcgttctgtgttggagcggctcgagcaggcctac
tgtggcaccattgggtatgagtacatgcacattgctgaccgtgaaaagtgtaactggctt
agggagaagatcgagacggttaacccaagggagtacacctacgatcgtcgccaggtcatg
ctcgataggcttatctggagcacacagtttgagaatttcttggcgaccaagtggactacc
gcgaagcgtttcggtcttgaaggtgcagagactctgatccctggcatgaaggagatgttt
gacagggcagctgatcttggtgtagagagtattgtcattgggatgccacacagaggcagg
ctgaatgttttgggaaatgtcgtgcggaagcccttgcgacagatcttcagcgagttcagt
ggtggtaccaagcctgttaatgaaggggaagggttgtatacagggactggtgatgttaag
taccatctaggaacttcgtatgatagacctaccaggggtgggaaacatattcatctgtca
ctggttgcaaacccgagtcatctggaagcagttgatcctgttgttgctgggaagacaaga
gcgaagcagtactattctaatgatcgtgacaggaccaaaaatttgggggtattgctgcat
ggtgatggtagtttctcagggcagggagttgtgtatgagaccctgcatctcagcgccctt
gagaactacaccactggtgggacaatacatattgtggtcaataatcaggttgcattcact
actgatccaaagtcagggagatcctcacagtattgcacagatgttgcaaaagcattggat
gctcccattttccacgttaacggtgatgatttggaggcagtggttcatgtctgcgagctt
gctgcagaatggcgacaaacatttcactctgatgtggtggtggacattgtatgctaccgg
cggtttggccataatgaaattgacgagccctcatttacccaacctaaaatgtacaaggtg
atccggaaccatccaagtgcgcttgagatttatcaaaataagctgttagaatctgggaag
atctcgaaggaagatattgacagattaaacaagaaggtcaacactatactgaatgaggaa
ttcaagaacagcaaagactatgtccccaacaagagggactggctttcagcttactggact
gggttcaagtcaccagagcagatttcacgtatcagaaacactggtgtgaagccggagatt
ctaaaacgtgttggagaagccatgactactctgccagaaaatttcaagcctcacagggct
gtgaagaagatttttgatcagcggcgtcagatgattgagactggagaaggcattgattgg
gcagtgggtgaagcacttgcttttgctactcttatagttgaggggaaccatgtcaggtta
agtggtcaggatgttgagaggggtacattcagccaccgtcattctgtcatacatgaccag
gaaactggagagcggtactgcccgctcgataatcttgttatgaaccaagatgaggagctt
tttactgtgagcaacagttccctgtcagaatttgctgttctgggctttgagttgggttac
tccatggagaacccaaactcactggtcctatgggaagctcagtttggtgattttgcaaat
ggagctcaagttatatttgatcagttcctgagtagtggggagtcaaaatggctccgccag
accggccttgtcgtgtgccttcctcatggatatgatggtcaggggcctgaacattctagt
gcaagactggagcgctttcttcagatgagtgatgacaacccgtatgttatacccgagatg
gattcaacactgcggaagcaaatccagcagtgcaattggcaggttgtgaatgtaacgact
cctgcaaattacttccatgttctgcgtcgccagatacaccgggacttcaggaagcctttg
attgtgatgtccccaaagaacctccttcgccacaaggattgcaagtcgaatctatctgag
tttgatgatcttgcgggccaccctggatttgacaagcaagggacacgcttcaagcggctc
ataaaggaccagaacaatcacaaggaccttgaggagggaatcaaccgtctagttctttgc
tctggaaaggtgtactatgaactggatgaagaaagaaggaagacagagcgcactgatgtt
gccatatgtagagttgagcagctctgcccgttcccatacgacctcatccagcgggagttg
aagagatatccaaatgccgagatcgtgtggtgccaggaggagccaatgaatatgggtgcg
tacagctacatcaacccccgcctgctgacggcgatgaaggccctgggcaggggcagcatc
gatgatatcaagtacgtgggcagggccccgtcggcggccaccgcgacgggcttctactcg
gtgcacgtgcaggagcagacggagctggtgcagaaggcgctgcagcgcgaccccatcaac
tacctgttctga
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