Panicum virgatum (switchgrass): 120642218
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Entry
120642218 CDS
T07260
Name
(RefSeq) 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like isoform X1
KO
K00921
1-phosphatidylinositol-3-phosphate 5-kinase [EC:
2.7.1.150
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00562
Inositol phosphate metabolism
pvir01100
Metabolic pathways
pvir04070
Phosphatidylinositol signaling system
pvir04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
120642218
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
120642218
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120642218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120642218
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.150 1-phosphatidylinositol-3-phosphate 5-kinase
120642218
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Macropinocytosis
Kinases
120642218
Endosome - Golgi transport
Others
Others
120642218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIP5K
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120642218
NCBI-ProteinID:
XP_039774611
LinkDB
All DBs
Position
7K:52663282..52670219
Genome browser
AA seq
1490 aa
AA seq
DB search
MILLPTRDDALGANPNHLLLHSYDPSRDYTLTSTGESELSDDAMWIPPEAADDMEHHHAA
SDTTSDDTTTEEDEEDSEDADGSFSWCQQGGYREERQKAMLRAMNGQLKMLAARFLESAG
IPAAFHQLQGADTCCWLDIVTSLSWEAALLIRPDATTGNEMDPSSHVKVKCLASGTRRQC
EVIRGLVFKKNAAHKHMPTRCHNPRLLLLRGVLGDSDNGFSSFSSIEQEKDHLEKSVCKM
MQICRPNVVMVEKTVSRDIQELLLEEGVTLVLDMKLNRLQRIARCSGSPILSFSEVLSKP
KLKQCDYFHIEKVIEEHNHTVEAGKRQSKTLMYLEGFRKPLGCTILLRGANSEELKKVKQ
VMHYTVFAAYQLVLETSFFEDQRVILNNKNASKEETSISSKAESSVIHHGIPAPSIGSHP
VVPKDNDASASKLYPLTCSESVEEPTKGKTVTVSSTKIEDLNSLEKGFPNELPEGPAIYY
DSNQALPSERLLLSVPGSPRRSIDILRYQNIYLPVTSSQEATDHQKEDMLQCCQIMAGNG
VHISPNVRVQVGSGENVDHLSNPQNQASTESNQQMALDDPSVSEQPSTPLENGEQQSTSY
VSGDKTSDIDEVDDVLESQSILILLSSQCITKQVICEQSHLSRIKYYGDFDVSLGRYLQD
ILQNQNLSCSSCGEPPEAHMYSYTHRNGNLTVLVKRLLKYCLPGESEGKIWMWTRCLRCE
YESGISRSSRRVLMSAEAHYLWFGKFLELSFSSHSTARRLSICGHSLNKDCLRFFGLGSK
VAMFQYSSVEIYTASKPQPTLEFHNPNAHEWYGQEVRNVLARGVMLFSEVTGLLQNLKDQ
FSKVVIYCRAFLPIEEFSQLEDMLIKEKSEFMCTLAQAVDRSGAPSSVHEILSVNWLYQD
LLLELYVWDRRLHQLVECISAERERMGISVKGTSEFTGDQIAVVAEADGVTECASNKVCF
ENGCIETDKFNEPGTGTTLLNENAWLENNELVARSMCPKQEPLRIRQQSRFPPWDDREKW
VWNPLHESRLTYRQELEVGCLERFELVNHYCPSHLSPLHRHNQSGEELGSSQFTVGPCGS
VLCVAEDEISSIISRALAISEERRYLLDAITESAPADSRVGECTKTMEKSYSSVSESSSA
CSSWSSSGSSDSEASISSDDLSSYDSSLLSSSQHPEISVNGRVALKGKYSVICVHSNQFY
NLRKKCCPSELAYITSLSRCKKWDAQGGKSKAFFAKTVDDRFIIKQIKRTEFESFIKFAP
DYFKHVYHSLDTGSQTCLAKILGIYQVKQIRHGKEIKMDLMVMENILFGHNVSRTYDLKG
AVFSRHVSDSNDHDTVYLDQNFVDDMRVSPIYIGGRTKHLLQRAIWNDTAFLTSINVMDY
SLLVGVDKQKHELVFGIIDYLRQYTWDKQLETWVKTSLVVPKNELPTVISPREYKKRFRK
FMSKYFLTVPDDWSTENRTVSCKSCAHAGSALPDEKHPQHPNPNPIVACA
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgctgcccacaagggacgacgccctgggtgctaatccaaaccatctgctgctg
cattcttatgatccatctcgggattacacccttaccagtactggtgaatctgaattgtcg
gatgacgccatgtggataccgcctgaggcagccgacgacatggaacaccatcatgctgcg
tcggatactacgtctgacgacactacaacagaagaagacgaggaggattctgaggacgct
gatggcagtttcagctggtgtcagcagggcggctacagggaggagcggcagaaagccatg
ctcagagccatgaacggccagctgaagatgctcgccgctcgctttctagagtcggctggc
atccctgctgctttccaccaattgcaaggcgccgacacctgctgctggcttgacatcgtc
acctccctgtcctgggaagccgcccttcttatcaggcctgatgccactaccggcaacgag
atggacccttcctctcacgtcaaggttaagtgcctagcttctggtacacggcgccaatgt
gaggtcatcaggggcttagtcttcaagaagaatgccgcccataagcacatgcccaccagg
tgtcacaatcccaggctgcttcttcttagaggagtcctcggtgattcggacaatggcttc
tcatcattcagttccatagaacaggaaaaagaccatctggagaaatctgtctgtaaaatg
atgcagatttgcaggccaaatgttgtcatggtcgagaaaacagtttcacgcgacatacag
gagcttctcctcgaggaaggcgtcactctggtgcttgatatgaagctcaaccggttgcaa
aggatcgctcgctgttctggctctcccatactatcgttctcagaggttctaagtaagcca
aagttgaagcagtgtgactacttccacatcgaaaaagttatcgaggagcacaaccatact
gttgaagctggaaagaggcaatctaaaacattaatgtacctggaaggctttcgcaagcca
ttgggatgcacaatattgctacggggagcgaatagtgaagaactgaagaaagtcaagcaa
gtcatgcactacacagtgtttgcagcataccagcttgttcttgagacatccttctttgaa
gatcagagagtaatattgaataataaaaatgcttccaaagaagaaacttctatcagtagt
aaggcagaatcatcagtaatacatcacggaatccctgctccctctattggctctcaccct
gtcgttcctaaagacaatgatgcttcagcaagtaaactgtatcccttaacttgtagtgaa
tcggtagaagaacccactaaagggaagacagttaccgtttcttcaacaaaaatcgaagat
ctaaattcacttgagaagggcttccctaatgagctccccgagggtccagcgatctattat
gattctaatcaggcacttccttctgaaagactattattgtcagtcccaggatcgccaaga
agatccattgatatattgcgttatcagaatatttatttaccagtcacgtcgtctcaagag
gcaactgatcatcagaaagaagacatgcttcagtgctgtcaaatcatggcaggtaatggt
gtacatattagcccgaatgtcagggtacaagtcggttctggtgagaatgtggatcactta
agcaatccccagaatcaagcatccactgaaagcaatcaacaaatggcattggatgatcct
tcagttagtgagcagccatcaactccattggaaaatggggaacaacaaagcaccagctac
gttagcggagacaagacctcagacatagacgaggtcgatgatgtcttggagtcgcagagc
atacttattttgttgtccagtcaatgtatcacgaagcaagttatctgcgagcaaagccat
ctatcccgtataaagtactatggagattttgatgtctccttaggacgatatttgcaggac
attttgcagaatcagaatctcagctgttcctcgtgtggagaacctccagaggctcacatg
tactcatacactcaccgcaatgggaatctgactgttcttgtgaagcgtttgcttaaatac
tgtttacctggtgaatcagaaggaaaaatttggatgtggactagatgtctaagatgtgag
tatgaaagtgggatctctagatcatcacgaagggtgctaatgtcagctgaagcacactat
ctttggtttgggaagttccttgaactcagtttttccagccattccactgctagaaggcta
tcaatatgtggacattcgctgaataaggattgcctgcgcttttttgggttgggctccaaa
gttgcaatgttccagtattcatctgtcgaaatttacactgcctccaaaccacagcctact
cttgagtttcacaatcccaatgctcatgaatggtacgggcaagaggtaagaaatgttctt
gctagaggagtcatgcttttctctgaagtcacagggttactacagaacctgaaggatcag
ttttctaaggtggtaatatattgtcgtgccttccttcctattgaagagttctcccaactt
gaagatatgttgattaaagagaagtccgagttcatgtgtactctagcacaggcagtggat
cgaagtggggcaccaagctctgtgcatgagatccttagcgtaaattggctctaccaggat
cttctgcttgaactatatgtgtgggatcgccggctgcatcaacttgtagagtgcatatct
gctgaaagagaaagaatgggaattagtgtcaagggaacttctgaatttacaggtgaccag
attgcagtagttgccgaagcagatggtgttactgaatgtgcaagcaacaaagtgtgcttc
gagaatggatgtattgagacagacaagttcaatgaaccagggactggcacaaccttgctt
aatgaaaatgcatggttggagaacaatgagctagttgcacgttcaatgtgtccaaagcaa
gagccgttgaggattcggcagcagtccagatttcccccatgggatgatagggaaaaatgg
gtttggaacccattgcatgaatccagattgacttacaggcaggaacttgaggtcggatgt
ctggaaaggttcgaacttgttaaccactattgtccatctcatctatcccccttgcacaga
cacaatcaatctggtgaggagttgggttcttcacagttcacagtaggtccatgtggcagc
gtcttgtgtgtagcagaggatgagatatccagcataatatcccgtgctcttgccatatct
gaggaacgtcgctacttactggatgctatcactgagagcgcaccagcagacagcagggtt
ggagagtgtactaaaacaatggagaagtcttacagctcggtatctgaaagttcctctgct
tgttcgtcctggtcgtcttccggatcttcagattctgaggcaagcatttcatctgacgac
ctctccagctacgatagctcgcttctgtcatcctctcagcatccggaaatatctgtcaac
gggagagtagctctcaaagggaaatattcagtaatctgtgtacactctaaccagttctac
aatcttcgaaagaaatgctgtccatcggagcttgcgtacattacatccttgagccgttgc
aagaagtgggatgctcaaggcgggaaaagcaaggctttctttgcaaaaacagtggatgac
agattcatcataaagcaaataaagaggacagagtttgagtccttcataaaatttgctcct
gattacttcaagcatgtttaccattctctggacactgggagccaaacttgccttgctaaa
atcctaggaatctaccaggtcaagcaaataagacatggcaaggagattaagatggacctg
atggtgatggaaaatatcctgtttgggcacaatgtatcccggacatatgatctgaaaggc
gctgtcttttcgcggcatgtctctgactcaaatgatcatgacaccgtgtacttggatcaa
aattttgtggatgacatgcgcgtttctccaatctacattggtggaagaacaaaacatctc
ttgcagcgggcaatctggaatgatacggcttttctcacttcgatcaatgttatggactac
tctctgctggtgggagtggacaagcagaagcatgagctcgtgtttggcatcatcgactac
ctgaggcagtatacatgggacaagcaactggagacatgggtgaaaacgtctctggtggtg
cccaagaacgaattgccaacagtgatttcccccagggagtacaagaagaggttcaggaaa
ttcatgagcaagtatttcctgacagttccagatgactggagcacggagaatcgcacggtg
tcctgcaaatcctgtgctcacgccggcagcgccttgccggacgagaaacatcctcagcat
ccaaatccaaatccaatcgtggcatgcgcgtag
DBGET
integrated database retrieval system
