Panicum virgatum (switchgrass): 120643306
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Entry
120643306 CDS
T07260
Name
(RefSeq) separase-like isoform X1
KO
K02365
separase [EC:
3.4.22.49
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120643306
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120643306
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.49 separase
120643306
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C50: separase family
120643306
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid separation proteins
Separase
120643306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C50
TPR_ESP1
TPR_ESP1_2nd
TPR_10
CHAT
Motif
Other DBs
NCBI-GeneID:
120643306
NCBI-ProteinID:
XP_039775631
LinkDB
All DBs
Position
1K:complement(52785435..52804224)
Genome browser
AA seq
2200 aa
AA seq
DB search
MEAAAADLLAALSSPSSHAGLRSRFKAYLQPFTPYLPTANPNPKPPPKRATKQNKQPPPD
AATLRPLAKRFLPFIARALQLLPPLVRASPGSGDAGGGGADDLLEIYGLLLDSLEAISPC
LAGKPYSVLLQRGRFVCCLESRGHLARANAEAAAALDALRSSLSPPTKSTKSRRGAADVA
PIILPDPGSAGDAGADPEVTILAVELTVCLANCASKGNVKEAAPYERVLSLVEQLQPWLR
ILADDVRTKYRTLLVNAMSRCNLFLVSESSSFNTDELVHNFCVSTIQEYVNARMTERLPA
VCVARKICSSVDFSWGGSTKLLLLVLKNIADSVVCVKADLLKAVNEFLVFVSYFARCILS
ANRDLCVGASELLYEQGRYFAEVPSPTASVLHLYATGLYYCTQKEGSEMPCLSADILNNE
KYLQALDKAVGSLAHMAHDSISLLTYLDSMEFVCKVLLQHANAVWKNFSEGKAVHYSRNM
DSILTTLHQFIDSSLKAYSCTKMSERDNKRLLEQRGTLLKTLVSTTKISFVTNKDVKESL
ASINSAISSKWITLEERKFLISSLGNIGVTLYNTGHDQEAAKALELCCYAIWAHVKFSYC
GLLSRTEGNGTMEHLSKDMLKDIFFDAFARIAKMVETLHRCGSKRTHEIVAMSLSKLLAY
DDMSEYFDSSSILIKLWVKITHKDFEGNQGVDRPPLLYHSLLDCSSPMPKKLIGLILEQE
LLAYGLMETRGSKFCAEMQIRVIDVLLDKIYYLEEHCLQRSRFLVRKAGALRACGVQNIE
SCLESLSEAISLLQTISKDSSQSNTTVINQLAIAQCLHAHCTLEGNPGCEVIFKNINSAL
SSWSKVETFDYSSPGQRPSQTIVPLLCSLVDLLAMKGCFKLQFDLCELMIRIWRQENLPL
RKIFSFLFTSGRLSHAYCHLPLDKEFISEAAEHLGVDCNHTDFWRNCFGGERPSLIMFLQ
RMLPSDLFFPQSCEQSLRFDVSVDEVNKAALSLVSEATSNDQAIFLAGYLYYDLSERFFS
CGQILQAFSYGKEALRLRKKLLKKKFKLNSGSSGNMESQCCGQDFGSLEAWGPTVAEIWP
DSSNSTSTRDSFLTSWSVLRCYLESTLQVAMMHELIGNGTEAEVLLRTGKEISKFHGLSV
FRIAFTSSLGQLYSKRQLWDEADSELKNAQDLLLEHDAIVSCKLCKLTLEISVDMKVGDL
FWSRFEKDFQKPSAVNLPMALSMYRSAIKKLNSTDLEFFTGSFGTLKTACHVCSKDCIIS
TEHGVCSGKEPVVSKDGMLPPCSVCLLLRQASVDHFDEPTALKALMEITRNAEGGPPLDV
KAKRTSRNSSRLAKEPNAETNAKTRTRSSKRTVHVKGDGLPADSLVGGESECFPGGIDLR
KDGLCNIFGCWKCLLVKSLNSGCIQNILQFRWDCVRRRCCVSLLLKIARALGSHRGNYVN
HEVHSVYWQCISLLYFRSLPQGCYKTYEPHLVGLIMDGSASDFFPLERAEILCSMSFFLL
KSSLCEQPRDVCCCLPNVQMSDILTWLLKAFVLSRESPSLCQEICRLLACTFLLSTTGSS
IHLPLCSQESLSLCHWAAYFHQMSVGTYHNYHYLASFQGLPRKKFLKGTFEDSRSEMHEG
VSAFVRFPSMDINHIEKDIIEFFQKLPDVPVVCISMIGGDYVDLLEEFLLLPSSLPAWML
LSRFDSAGKPTTMLLPVIAISEEMPSADSSIKDLGNPMEFGKKWQCPWGYGITDYVVPIF
KSILEENFVSLSSATITTNAVQADHVRWWSHRMKLNNYLDGTLKNMEKSWFGPWKCLLLG
HQLSDKDIDEASASIITGLETKLEVNPALIKAILGGALSADEVQECVYQLILYKGYFGRG
ACCGKDRLRAFSSCQIEDEALETLKCLITNALYALPEPADRDPVILVLDVNVQMLPWENL
PVLRNQEVYRMPSMGSIFLALSRNKDDSAIAPPFPVIDPSKTYYLLNPSGDLSSTQEEFH
ELFRNYEWEGMAGSWDGQKTKELVLALTNHDLFLYFGHGSGTQYVSGKEIEKLNNCAAAL
LMGCSSGTLHCKGSYAPRGAPLSYLFAGSPAIVANLWDVSDKDIDRFSKALLNSWLQENF
TDDNSCSKCSLLIKEFESMNIASKDNGRARRKGTRGRKPQQIKDITKCCSCRQKRIASYL
SEARRACRLPFLIGASPVCYGVPTIIRKKVMTDSVIGEER
NT seq
6603 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgccgccgccgacctcctcgccgccctctcgtccccgtcctcccatgccggc
ctccgttcccggttcaaggcctacctccagcccttcaccccctacctgcccaccgcaaac
cctaaccccaagccgccgccgaagagggcgacgaagcagaacaagcagccgccgcccgac
gcggctaccctccgacccctcgcgaagcgattcctcccgtttatcgcccgcgcgctccag
ctcctcccgccgctcgtccgcgcgagtcctggctcgggcgacgcgggtggtgggggcgcc
gacgatctcctcgagatctacggcctcctcttggattccctcgaggccatatcaccttgc
ctcgcggggaagccctactccgtactacttcagcgaggccgcttcgtgtgctgcctcgag
tcgcgcggccaccttgctcgcgctaatgcggaggcggccgctgccctcgacgcactccgc
tcctcgctctctccacccaccaagagcaccaagtcacgaagaggcgccgcagacgttgct
cccattatccttccggaccctggtagcgctggggacgctggcgcggaccctgaagtcacc
atcctcgcggtcgagctcacagtttgccttgctaattgtgccagcaagggcaacgtgaag
gaagctgccccttatgaacgggttctcagtctggttgagcagctgcagccatggcttcgg
attctggctgatgacgtccgcacgaagtatcgcacgcttcttgtgaatgcaatgagccgc
tgcaaccttttccttgtttctgagtcttcatccttcaatactgatgagctggtgcataat
ttctgtgtttctacgatacaagagtatgtgaatgctaggatgactgagcgtttgccagca
gtatgtgttgctcgcaagatttgctcttctgtagatttcagctggggagggagcacaaag
cttttgctccttgtattaaaaaacatagctgattctgttgtatgtgtaaaggctgactta
ctgaaagctgtaaatgagtttttggtatttgtgtcatactttgctcggtgcattctttct
gctaatagggatttatgtgttggcgcttcagagctactttatgaacaaggtcgctatttc
gctgaggttccctctccaaccgcttcagttcttcatctttatgcgactggattatactat
tgtacccagaaagagggaagtgaaatgccctgtttatccgcagacattctcaacaatgaa
aagtatttacaagctttagacaaagcagttggatcattggcacatatggcgcatgatagt
atatctttgttgacatacttagattctatggagtttgtttgcaaggtgttattgcagcat
gcaaatgcagtttggaagaacttctctgaaggaaaagcagtccattattccagaaacatg
gattctatcttgacaacactgcatcagttcatcgattccagcctcaaggcttatagctgt
acaaaaatgtctgaacgtgacaacaagagactgcttgaacagcgtggaaccttgctgaaa
actcttgtttcgacgactaaaatttcttttgttactaacaaagatgtcaaggaaagcctg
gcctcaatcaattctgcaatttcaagtaaatggataacgctcgaggagcgcaaattcttg
atatcttcacttggcaacattggagtgacactctataatactggacatgaccaagaggca
gcaaaagctttggaactatgctgctatgcaatatgggcgcatgtcaagttttcttactgt
ggattattgtcaaggacagaaggaaacggaactatggagcatttgtcgaaggatatgttg
aaagatatcttctttgatgcatttgcacgaattgcgaagatggttgaaactctacataga
tgtggatcaaaaaggacacacgagattgttgcgatgagcttgtctaaattgttggcttat
gacgacatgtctgaatattttgatagttcttcgatactgatcaaattgtgggttaagatc
acacacaaagattttgagggtaatcaaggtgtggatcgtcctccacttctgtatcactct
cttttggactgctcgtctcccatgccgaaaaaattgataggcttaattctagagcaggag
ttgttagcatatggattgatggaaactcgaggctcaaaattctgtgctgaaatgcagata
agggtcatagatgttcttttggataaaatttactatttagaagaacattgtttgcagaga
tcaaggtttcttgtcagaaaagctggtgcgcttcgtgcatgtggagtgcaaaacatagaa
agctgcctcgagtctttatctgaagccatatcattactgcaaaccatctcaaaggattca
tctcaaagcaacacaactgtgatcaatcaattggctattgcgcaatgcttgcatgcccat
tgtaccctggaaggcaatcctggttgcgaggtaatatttaaaaatattaatagtgcattg
agctcgtggtcaaaagtggagacttttgattattcttctcctggtcaacggccatcacaa
actattgtaccacttctttgttccctggttgatttgttggctatgaagggctgctttaag
cttcaatttgacttgtgcgagcttatgataaggatatggaggcaagaaaacctacccctt
cgaaagatattttcctttctgttcaccagtgggcgccttagccatgcatactgtcatctc
ccattggacaaggaatttatttctgaagctgcagagcatcttggtgtagattgcaaccac
actgatttttggagaaactgttttggaggagaacgtccttctctcattatgtttcttcag
agaatgttgccgagtgacttatttttccctcaatcttgtgaacaatccttacgttttgat
gtcagtgttgatgaggtcaataaggctgccttgtctctggtttctgaagctacttcaaat
gaccaagcaatttttctagctggatacctatactatgatttatcagaaagatttttttca
tgtggacaaattctccaggccttttcatatggaaaagaagcactccgtttgcgcaaaaag
ctcctaaaaaagaaattcaaacttaattcgggcagctctggaaatatggaaagccaatgt
tgcggacaggacttcggttctcttgaagcatggggaccaacagtagctgaaatttggcca
gattccagcaattcaaccagcactagggattcttttcttacttcatggagtgtacttaga
tgctatcttgagagcactttacaggtcgctatgatgcacgaattaattggtaatggaact
gaagcagaagttctgttacggactggaaaagagatatcaaaattccatgggctatcggtc
ttccgtattgcttttacatcatcgctaggtcaactgtacagcaagcgacagctatgggat
gaagcagatagtgaacttaaaaatgcccaagatcttctactggaacatgatgccattgtt
tcatgtaagctgtgcaagttaactttggagatatcagtcgacatgaaagttggtgatcta
ttttggagtcgctttgaaaaagatttccagaaaccgtcggcagttaatttgcctatggct
ttgagcatgtaccgatctgcaataaagaaattgaacagcactgacttggaattttttact
gggtcctttggtaccctcaaaactgcttgtcatgtgtgcagcaaagattgtattatatca
actgagcatggggtttgtagtgggaaagaaccagtagtttcaaaggatggtatgttacct
ccatgcagtgtttgtctattgttgagacaagcatctgttgatcattttgacgagcccaca
gcattgaaagctctaatggaaatcacgaggaatgctgaaggaggtccaccattagatgtt
aaagctaagaggacatccagaaattcgtcacgtttagctaaggaacctaatgcagagact
aatgcaaagactagaactcgctctagtaagcgaactgtacatgtgaaaggtgatggattg
cctgcagattctttagttggtggtgaatcagagtgtttccctggcggcattgacctcagg
aaagatggcctgtgcaatatatttggctgctggaaatgtcttttggttaaatcactcaat
tctgggtgcattcaaaatattttgcagttcagatgggattgtgttcgccggcgctgctgt
gtgtcacttctattgaaaatagctagagccttgggatctcacaggggaaattatgtgaat
catgaagtccatagcgtctattggcagtgcatatcattgctatacttcagatcccttcca
cagggttgttataaaacctatgagcctcatttggttggactcatcatggatggaagtgct
agtgattttttccctttagaacgtgcagaaatattatgcagtatgagcttctttttgcta
aaaagctccctttgtgaacagccaagggatgtctgttgctgtctccctaatgtgcaaatg
tctgatattcttacctggttgctcaaagcttttgttctatccagggagagtccctcactt
tgtcaggagatttgcaggttacttgcatgcactttcttgctatcgacgacaggttcctcc
atccacttgcctttgtgttctcaagaatctctttctttgtgtcattgggctgcatacttc
catcaaatgtctgtgggaacttatcacaattatcattaccttgctagttttcaagggttg
cccaggaaaaagtttttgaagggcacctttgaagattccagaagtgagatgcacgagggt
gtctcagcatttgtcaggtttccatcaatggacataaaccatattgagaaagatataata
gaattcttccaaaaacttccggatgtaccagttgtgtgtattagtatgattggaggagat
tatgttgatctccttgaggaatttcttctccttccttcctctcttcctgcttggatgttg
ctttcaaggtttgattcagctggcaaacctacaacaatgcttcttccagtgattgctatt
tcagaagaaatgccatctgctgattcttccatcaaagatttgggcaatccaatggaattt
ggtaagaagtggcaatgcccttggggttatggaattacagactatgtggtccctattttc
aaaagtatactcgaggagaattttgtatccctctctagtgcaacaatcactacaaatgct
gtgcaagctgatcatgtcagatggtggtcgcatagaatgaagctcaacaactaccttgat
ggcacactgaaaaacatggaaaaatcttggtttggaccctggaaatgccttctcttgggc
caccaattatctgataaagacattgatgaagcctccgcaagtattatcactggtctggaa
acaaaattggaagttaatccagcgctcatcaaggctatccttggcggtgctttatcagcg
gatgaagttcaagaatgtgtttatcaacttattttgtataaaggttactttggaagggga
gcttgctgtgggaaggatagacttagagctttctcttcctgccagattgaggatgaagct
ttggagacactcaaatgtttaataacaaacgccctatatgcgctacctgagccagctgat
agagatccagtcattttagttcttgatgtcaatgtgcagatgcttccttgggagaatttg
cctgtattaaggaatcaagaagtttatcgtatgccatcaatgggtagcatctttttagcg
ttatctcgaaacaaagatgacagtgccatagcccctccttttcctgttattgatccttcc
aaaacatattatctgttgaatcctagcggtgacctgagcagcacacaagaagaatttcat
gaattattcaggaactatgagtgggagggaatggctgggtcttgggatggacaaaagacc
aaagagctggtcttggccttgacaaatcatgaccttttcctatactttggacatggaagt
ggtacgcagtacgtttctgggaaagaaatagagaagctaaataactgtgcagctgctctt
cttatgggatgtagcagtggaacacttcattgcaaagggagttatgctcctcgaggggcc
cctttgtcctatttatttgctggctcccctgctatcgttgcaaacctctgggacgtttca
gataaggatatcgaccggtttagcaaagctttgctcaattcatggttgcaagaaaatttt
acggatgacaacagttgctccaagtgttccctgctaataaaagaatttgagtccatgaat
attgcttccaaggataatggtagggcaagaagaaaaggcacgcgagggaggaagccacaa
caaataaaggatattaccaagtgctgcagctgcaggcagaagcgaatagcttcatatcta
agtgaagctaggcgagcttgcaggcttccgtttctgattggtgcatctcctgtgtgttac
ggcgtgcctacaattattaggaagaaagtaatgactgattctgtgataggagaagagagg
tga
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