Panicum virgatum (switchgrass): 120644957
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Entry
120644957 CDS
T07260
Name
(RefSeq) phosphatidate phosphatase PAH2-like
KO
K15728
phosphatidate phosphatase LPIN [EC:
3.1.3.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00561
Glycerolipid metabolism
pvir00564
Glycerophospholipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00089
Triacylglycerol biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
120644957
00564 Glycerophospholipid metabolism
120644957
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120644957
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.4 phosphatidate phosphatase
120644957
Protein phosphatases and associated proteins [BR:
pvir01009
]
HAD phosphatases
Other HAD phosphatases
120644957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LNS2
Lipin_N
Lipin_mid
HAD_PNKP
LNS2_PITM1-3
APP1_cat
Motif
Other DBs
NCBI-GeneID:
120644957
NCBI-ProteinID:
XP_039777631
LinkDB
All DBs
Position
8K:47798317..47805739
Genome browser
AA seq
1451 aa
AA seq
DB search
MYAVGKFGSLISRSVYTVSGPFHPFGGAVDIVVVQQQDGSFKSSPWYVRFGKFQGVLKSR
EKVVSISVNGVEAGFHMYLDGNGEAYFLRNADPNGEEGEFVLSPASSGDEMEVPIQEAQL
RKSKSTSCDSSTMEADVGESKILARTTSRRTTILERMFGRKSVKNNAHAVDRVSSLERAE
IAAELLDTKWSTNLPRSSKSHSSNDESSKSKLVEASNSDQMETSKTVLPEHSLDHGKEMD
SNCNGADCNSYSHHGGRNSSADETDPCLQTTSVKEEVIEIHTRETSDFTDRIISTVHQQG
SEFLSNDLGTDKSIHESVNTQGELLHNSEDDAGREIITKEAFSNGIFEIHTIETNTTSGK
SEVVSQFVTVDSDGANQNLTGANSPAYATTDVPTEKNEVTFIPSAHDPVQEKVVILSSSE
TVEISQDAVQEKMVILSSSETLESSYAVSSISDDKVHAASDISLADSVEREGDSRVNDGS
KQELFSEESSFACCGAPSNKKDMINVVVEEHEAFILEDPAPQILKDNGPDMDISVNSVSL
SHTDAAHDLACQHDVVCPDASTSVIETSSYVPDNDPEDVTNNLTVENKACGIELDVSATQ
TPTIGDGSTECNAQSANFPNTIVENSPTATGSSSLVNNHENVTKNLIVENKACNREPDVS
VTLTSTIGDGPAECTAQSANFSNKIEIDGSPAIPGSSSLVNDPEDVTVNLIVENKACNRE
PNVFVTLTSTIGDGSTECTAQSANFPKKIEVEGSPTVAGSSSLANDPEDVTENLIVENEA
CNREPDVFVTLTSTIGDSPTECITQSATSPNKIEAEGSPTATGSSSLVDVEVQNTKTEDE
TGRSSSVSGGEVGFVLEATAEPEEEAEAAVSFSEYTEEIQFQFSDTEYFVDRKAMDDIVA
DKTAVKGGHDESDCDTEKQEGRGVDLANELENCSDSLRPVTSPVSIPTSDLQSGNNSIEA
KSLPNLRSHIHDLERPDSFQLSRSLQSNAENNGVDPVKSANSSFLEQKPEVTGDSEENSS
PPEVTSNVVPDDKHADSLKVDSFTPFAEFSLCRHLLSEGMGEDAARSAFDSEMVTLEKFR
TMKQSLIRNNKLVVRIAGRYFPWDAAAPIVLGLISFSEEQVFEPKGMIKVERVEPSAEPG
GSWRIWPFSFRRTRTISAVQPVCESTVETSVSTPAKESTPVNELDRERNKSKAKRIERKV
RSLTPTSEELASLDLREGKNVVTFTFSTAIVGKQQVDCHIYLWKWNTRIVISDVDGTITK
SDVLGQFMPLVGVDWSQNGVAHLFSAIKENGYQLLFLSARAISQAHITRRFLFSLKQDGK
ALPDGPVVISPDGLFPSLYREVIRRAPHEFKISCLEAIKDLFPPDSNPFYAGFGNRDTDE
LSYLKVGIPMGKIFIINPKGEVAVNRRVDTKSYTSLHALVHGMFPPISSSSEQEDYNTWN
YWKMPLPDVDM
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccgtggggaagttcggcagcctcatctcccgcagcgtgtacaccgtctccggc
ccgttccacccgttcggcggcgcggtcgacattgttgtcgtgcagcagcaggacggcagc
ttcaagagctcgccgtggtacgtccggttcggcaagttccagggggttctcaagtcaagg
gagaaggtcgtcagcatctctgtcaatggcgttgaagctgggttccacatgtacttggat
ggcaatggcgaggcctacttcctcaggaacgcagacccgaatggcgaggaaggtgaattt
gttctctcccccgcatcgtcaggtgatgagatggaggtaccgatccaggaagctcagtta
aggaagtcgaagagcacttcgtgtgatagctccacgatggaggctgatgttggggagagc
aagatactcgcgaggacaacatcaaggcggaccaccatacttgaacggatgtttggtcgg
aaatcagttaagaacaatgcacatgctgtggatagagtgagctcattagagcgagcagag
attgctgccgaactccttgatacaaagtggtcaacaaatcttccgcggagttcgaaatct
catagttctaatgatgaatcttccaagagcaagttggtcgaagctagcaacagtgatcag
atggaaacctcaaagactgtactgccagaacatagcttggatcatgggaaagagatggac
tctaactgcaatggtgctgactgcaattcctatagtcatcatggaggaagaaacagttcg
gcagatgaaactgatccgtgtttacaaaccactagtgtgaaggaagaggttattgagata
catacacgtgagactagtgacttcactgataggatcatctcaactgtgcatcaacaagga
tcagaatttttgtcaaatgatctgggaacagataagagtatacatgagtctgtcaatact
caaggtgagttgctgcataattcggaagatgatgcaggaagggaaataatcacaaaggag
gccttttccaatggcatttttgaaatccataccattgagacaaacactacaagcggtaag
agtgaggtggtttctcagtttgtcactgtagattcagatggagccaaccaaaatttgact
ggtgccaattcaccagcttatgcaaccacagatgtaccaactgaaaagaatgaggttacg
ttcatcccttctgcacatgatccagttcaagagaaagtagttattctaagcagttctgaa
actgtggagatttcacaagatgcagttcaagagaaaatggtcattctcagcagttctgag
actctggagagctcatatgctgtgtccagtatttcagatgacaaagttcatgctgcatca
gatatctcactggctgacagtgtagaacgcgagggggattccagagtcaatgatggaagt
aaacaagagctattttctgaggaaagctcatttgcatgctgcggtgctcccagcaacaaa
aaagacatgattaatgtggttgttgaagaacatgaagcttttatcttagaagatccagct
ccccaaatcttgaaagataatggtccagatatggatatttctgtgaacagtgtttcactt
tcacatacagatgcggcccatgatttagcttgtcagcatgatgtggtttgtcctgatgct
tctactagtgttatagagacatcaagttatgtgcctgacaacgatcctgaagatgtaaca
aacaacttaactgtggaaaataaagcatgcggcatagagcttgatgtttctgctactcag
accccaacaataggagatggatccacagaatgcaatgctcagtcagctaattttcccaat
acaatagtagagaattcaccaactgctactggatcttccagtttggtcaataatcatgag
aatgtaacaaagaacttaattgtggaaaataaagcatgcaacagagagcctgatgtttct
gttactctgacctcaacaataggagatggacccgcagaatgcactgctcagtcagctaat
ttctctaataaaattgaaatagatggttcaccagcaattcctgggtcttccagtttggtc
aatgatcctgaagatgtaacagtgaacttaattgtggaaaataaagcatgcaacagagag
cctaatgtttttgttaccctgacctcaacaataggagatgggtccacagaatgcactgct
cagtcagctaattttcctaagaaaatagaagtagagggttcaccaactgttgctgggtct
tccagtttggcaaatgatcctgaagatgtaacagagaacttaattgtggaaaatgaagca
tgcaacagagagcctgatgtttttgtcactctgacctcaacaataggagattcacccaca
gaatgcattactcagtcagctacttctcctaataaaatagaagcagagggttcaccaact
gctaccgggtcttccagcttggtcgatgttgaagtgcaaaacacaaaaacagaagatgaa
acgggaagatccagttctgtgagtggaggtgaagtaggatttgtgcttgaggctacagct
gagcctgaggaagaagcagaagcagcagtatcattctctgagtatacagaagaaatccag
tttcaatttagtgatactgaatattttgtggatagaaaggctatggatgacatagtggct
gacaaaacagcagtcaaaggaggacatgacgaatctgattgtgacacggaaaagcaggaa
ggacgtggtgtagatcttgcaaatgaattggaaaactgctctgattctttaaggcctgtg
actagccctgtttctattcctacaagtgacctgcagtcaggaaataacagcatagaggct
aagtctctaccaaatctccgttctcacatacatgatcttgaaaggcctgatagttttcag
ctaagccgctcactacaatcaaatgctgaaaataatggggttgacccagtcaagagcgcg
aattcttcttttcttgagcagaaaccagaagttactggtgattcagaagaaaattccagc
ccacctgaggttaccagcaatgtagtacctgatgacaagcatgctgacagcctgaaagtt
gattcattcaccccttttgcagaattttcactatgcaggcacctgttatctgaaggcatg
ggggaggatgccgcccgcagtgcatttgattctgagatggtaaccttagagaagttccgt
accatgaagcagtcactaataagaaacaataagctagttgttaggattgctggccgctat
tttccctgggatgcagctgcgcctatagtgctcggtttgatttctttcagcgaggaacaa
gtttttgaacccaaaggcatgataaaggtggagcgagttgagccaagtgcagaaccaggt
gggagttggagaatctggccatttagtttcagacggacaaggactattagtgctgtccag
ccagtttgtgaaagcactgttgagacttctgtatccactcctgctaaagaatcgacacct
gttaacgaattagatagagaaaggaataaatccaaggcaaagaggattgagaggaaggtg
cgatcactcactccaacgtctgaggagcttgcatctcttgatcttagagagggcaagaac
gtggtaacatttaccttctcaactgcaattgttgggaaacagcaggttgattgtcacata
tatttatggaaatggaatacacgcattgtcatatcagatgtggatggaactatcaccaag
tctgacgttcttggccagttcatgccattggttggtgttgattggtctcaaaatggagtt
gctcatttgttttctgcaataaaggaaaatggatatcagcttctatttctgagtgcacgc
gctatttcacaagcccacattacaaggcggtttcttttcagcttaaagcaggatggcaaa
gcacttcctgatggccctgttgttatatctccagatggtctcttcccttcactttacaga
gaagttatcagaagagctcctcatgaatttaagatttcatgcctagaggctatcaaagat
ttatttcctcctgactcgaatccattttatgctggattcggaaatagagatacagatgag
cttagttacctcaaagttggtattcctatgggcaagatcttcataataaaccccaagggt
gaagttgcagtaaatcggcgagttgatacaaagtcatacacatccctgcatgctcttgtc
catggaatgttcccaccaatatcatcatcttcggagcaggaggactacaatacctggaat
tactggaaaatgccattgcctgatgttgatatgtga
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integrated database retrieval system
