Panicum virgatum (switchgrass): 120646696
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Entry
120646696 CDS
T07260
Name
(RefSeq) NHP2-like protein 1
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
pvir03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120646696
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120646696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120646696
03009 Ribosome biogenesis [BR:
pvir03009
]
120646696
Spliceosome [BR:
pvir03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120646696
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
120646696
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
Motif
Other DBs
NCBI-GeneID:
120646696
NCBI-ProteinID:
XP_039779061
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Position
9K:complement(61254707..61256809)
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AA seq
128 aa
AA seq
DB search
MSQEAVNPKAYPLADAQLTISILEIIQQAANYKQLKKGANEATKTLNRGISEFVVMAADT
EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKQPIQSLK
DSIEKLLI
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggaggcagtgaaccccaaggcgtacccgctggcggacgcgcagctgacgatt
agtatcctcgagatcatccagcaggccgccaactacaagcagctcaagaagggcgccaac
gaagcgacgaagaccctaaacaggggaatatcggagttcgtggtgatggcggctgacact
gagccgctcgagatccttctccacctccccttgctagctgaggataagaatgtgccatat
gtatttgttccatcgaagcaagctcttggacgcgcttgtggtgtgacaagaccggttatt
gcttgctcagtgaccagcaacgagggtagccagctgaaacagccgattcagagtctcaag
gactctatcgagaagcttctcatctga
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