Panicum virgatum (switchgrass): 120646810
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Entry
120646810 CDS
T07260
Name
(RefSeq) probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial isoform X1
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00540
Lipopolysaccharide biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
120646810
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pvir01005
]
120646810
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
120646810
Lipopolysaccharide biosynthesis proteins [BR:
pvir01005
]
Lipid A
120646810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-GeneID:
120646810
NCBI-ProteinID:
XP_039779221
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Position
9K:complement(62560998..62568585)
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AA seq
325 aa
AA seq
DB search
MSSAAAQALKFVSRAALSWKPTRRPQQTLAATVSRSGVGLHSGARVTATLIPAHAGEGRY
FLVDGEEEARLAAEVGNAEPRSQLCTTLRRTEGGGPRVRTVEHLLSAMEALGVDNCRVEV
SGGDEIPLLDGSAQEWVEAIQSAGLCAAQDTSGRNLEKLAPQINEPVYLQRDDCFIAAFP
SLQIRISYGIDFPKVPAIECQWFSTYLDPNIYSSKIAPARTFCIFEEIEKIRGAGLIKGG
SLENAMVCSMSGGWLNPPVRFEDEPCRHKILDLIGDFSLLAQNGNQGFPIAHIVAYKAGH
ALHTHFLSYLSGKITVDQEELAGQC
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgccgccgcccaagccctcaagttcgtctcccgcgctgccttgtcctggaag
ccgacgaggcggccgcagcaaacgctggcggcgaccgtgagcaggtctggcgtgggcctc
cactcgggcgcgcgtgtcactgcaacgctaatcccggcgcacgccggcgagggtaggtat
ttcctcgtggacggcgaggaggaggcgaggttggcggcggaggtggggaacgcagagcca
cggtcgcagctctgcacgacgcttcggcggaccgaaggcgggggcccgcgggtccgcacg
gtggagcaccttctctctgcgatggaggcgctaggcgtcgacaattgccgcgtcgaggtc
agtggcggcgacgagattcctttgcttgatggatcagcacaagagtgggtagaggcaata
caaagtgcaggtttgtgtgcggcccaggatacaagtgggcgaaacttggagaaactggcc
ccccaaattaacgaacctgtttacttgcagagagatgactgcttcatagctgcattccct
agcttgcaaatccgcatcagctatggaattgatttcccaaaggtgccagcaattgagtgt
caatggttttctacatacctggatcctaatatatactcaagcaagattgctccggcaaga
actttctgtatatttgaagagatcgaaaaaatacgtggtgctgggctcatcaaaggaggg
tcactagaaaatgctatggtttgcagcatgtctggtggctggctaaatccaccagtgcgg
tttgaggatgaaccttgccgtcacaaaattttagatcttataggtgacttctcgcttctt
gcacagaatggtaaccagggtttcccaattgctcatatagttgcctataaggctggtcat
gcgctgcacactcatttcctgagctatctgtctggaaagatcactgtggaccaagaagag
cttgctggacaatgctga
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