KEGG   Panicum virgatum (switchgrass): 120647077
Entry
120647077         CDS       T07260                                 
Name
(RefSeq) 15-cis-phytoene desaturase, chloroplastic/chromoplastic-like isoform X1
  KO
K02293  15-cis-phytoene desaturase [EC:1.3.5.5]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00906  Carotenoid biosynthesis
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
Module
pvir_M00097  beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00906 Carotenoid biosynthesis
    120647077
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.5  15-cis-phytoene desaturase
     120647077
SSDB
Motif
Pfam: Amino_oxidase NAD_binding_8 DAO Pyr_redox Pyr_redox_2 FAD_binding_2 HI0933_like FAD_binding_3 Thi4 FAD_oxidored MurD-like_N Lycopene_cycl UDPG_MGDP_dh_N DUF3562
Other DBs
NCBI-GeneID: 120647077
NCBI-ProteinID: XP_039779629
LinkDB
Position
9K:complement(65245977..65251635)
AA seq 574 aa
MDTGCLSSMNITGVSQARSFAGQFPTRRCFASSHLASFAVKSLVLRNKGRSSHRRHSALQ
IVCKDFPRPPLESTINYLEAGQLSSFFRNSKRPSKPLQVVIAGAGLAGLSTAKYLADAGH
KPILLEARDVLGGKIAAWKDEDGDWYETGLHIFFGAYPNIQNLFGELGIEDRLQWKEHSM
IFAMPNKPGEFSRFDFPETLPAPVNGIWAILKNNEMLTWPEKVKFAIGLLPAMLGGQPYV
EAQDGLTVSEWMKKQGVPDRVNDEVFIAMSKALNFINPDELSMQCILIALNRFLQEKHGS
KMAFLDGNPPERLCMPIVDHIRSRGGEVRLNSRLKKIELNPDGTVKHFALTDGTQITGDA
YVCAAPVDIFKLLVPQAWSEISYFKKLEKLVGVPVINVHIWFDRKLKNTYDHLLFSRSSL
LSVYADMSVTCKEYYDPNRSMLELVFAPAEEWIGRSDAEIIDATMEELAKLFPDEIAADQ
SKAKILKYHVVKTPRSVYKTVPNCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSG
KLCAQSIVQDYSRLSLRTQKSLQSEEVEEVPVAS
NT seq 1725 nt   +upstreamnt  +downstreamnt
atggatactggctgtttatcatctatgaacattactggagtgagccaagcaagatctttt
gcggggcaatttcctacccggagatgctttgcaagtagtcaccttgcaagctttgctgtg
aaatctcttgtcttgaggaataaaggaagaagctcacaccgtagacattctgctttgcag
attgtctgcaaggattttccaagacctccgctagaaagcacaataaactatttggaagct
ggacagctctcttcattttttaggaacagcaaacgccccagtaaaccattacaggtcgta
attgctggtgcaggattagctggtctgtcaacagcaaaatatctggcagatgcaggccat
aaacccatattgcttgaggcaagagatgttttgggcggaaagatagctgcttggaaggat
gaagatggagattggtacgagactgggcttcatatcttttttggagcttatcccaacata
cagaatttatttggcgagcttggtattgaggaccgtctgcaatggaaagagcactccatg
atatttgccatgccgaataagccaggagaattcagccggtttgatttcccagaaactttg
ccagcacctgtaaatggaatatgggccatactgaaaaataatgaaatgcttacctggcct
gagaaggtgaagtttgctattggacttctgccagcaatgcttggtggtcaaccttatgtt
gaagctcaagatggcttgacagtttcagagtggatgaaaaagcagggtgttcctgatcga
gtgaacgatgaggtttttattgcgatgtccaaggcactgaatttcataaatcctgatgag
ctatccatgcagtgcattttgattgctttgaaccgatttcttcaggagaagcacggttcc
aaaatggcattcttggacggtaatccacctgaaagactatgtatgcctattgttgatcac
attcggtctaggggtggtgaggtccgcctgaattctcgtcttaaaaagatagagctgaat
cctgatggaactgtgaaacattttgcacttaccgatggaactcaaataactggagatgct
tatgtttgtgcagcaccagttgatatcttcaagcttcttgtacctcaagcgtggagtgaa
atttcttatttcaagaagctggagaagttggtgggagttcctgttatcaatgttcatata
tggtttgacagaaaattgaaaaacacatatgaccaccttcttttcagcaggagttcactc
ttaagtgtttatgcagacatgtcggtaacctgcaaggagtactatgatccaaaccgttca
atgctcgagttggtctttgctcctgctgaggaatggattggtcgaagtgacgctgaaatc
attgatgcaactatggaagagctagccaagttatttcctgatgaaattgctgctgatcag
agtaaagcaaagattcttaagtatcatgtggtgaagacaccgagatcggtttacaaaacg
gtcccaaactgtgaaccttgccgacctctccaaaggtcaccgattgaagggttctatctg
gctggcgattacacaaagcagaaatacttggcatccatggaaggtgcagttttatccggg
aagctttgtgcccagtctatagtgcaggattatagcaggctctccctcaggactcagaaa
agcttacaatctgaagaagtagaagaagttccggtcgcatcttaa

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