Panicum virgatum (switchgrass): 120647117
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Entry
120647117 CDS
T07260
Name
(RefSeq) probable lipoxygenase 6
KO
K00454
lipoxygenase [EC:
1.13.11.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00591
Linoleic acid metabolism
pvir00592
alpha-Linolenic acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00591 Linoleic acid metabolism
120647117
00592 alpha-Linolenic acid metabolism
120647117
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.12 linoleate 13S-lipoxygenase
120647117
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Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
120647117
NCBI-ProteinID:
XP_039779680
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All DBs
Position
9K:complement(65542726..65548861)
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AA seq
922 aa
AA seq
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MAAPWRELTGLRRAAAAAARPPVPGRRCANELCLAPFHHRAPRQQQQEGRRRRQLRRGVK
AVAAISEDLPRLAAPGTKGARAPEKVLMRAALTVRRKQKEDLKEALAGHLDALRDMVGLN
VALELISTKIHPRTKKPMQSGQASIKDWCQKRGSKGEHVVYTAEFMVDSDFGEPGAITVA
NRHHREFFLESIVVEGGLLCGPVHFACNSWVQSTRELQAKRVFFSNKPYLPSETPPGLRD
LRDKELKDLRGDGTGVRKLCDRIYDYATYNDLGNPDRGKEFIRPILGGEKIPYPRRCRTG
RPPTDTSMLAENRVEKPHRIYVPRDEAFEELKQGAFSAGRLRAVLHTLIPSMIATISAET
HNFQGFHHVDNLYKEGLRLKLGLQEHLFQKIPLVQKIQESSEGMLRYDTPSILSKDKFAW
LRDDEFARQIVAGINPVNIERLTVFPPVSKLDPAIYGSPESSIKEADITCHLNGLTVQQA
MDEAKLFILNYHDIYLPFLDRINAIEGRKAYATRTILFLTQVGTLKPIAIELSLPPSQPG
QPRPSKVLTPPCDATTNWLWMLAKAHVSSNDAGVHQLVNHWLRTHAIMEPFILAAHRRMS
AMHPIFKLLHPHTRYTLEINALARQSLISADGVIESCFTPGPVSGEISAAYYRDHWRFDL
EGLPSDLVRRGVAVEDASQPHGIRLLIEDYPYANDGLLLWSAIRSWVESYVQLYYPDAGT
VQSDDELQGWYHETVHVGHADIQHAPWWPTLSTPDGLASILTTLIWLASAQHAALNFGQY
PLGGYVPNRPPLMRRLLPDPERDAAEYAAFLADPHRFFLNAMPGVLEATKFMAVVDTLST
HSPDEEYLGEGRDEPWTGDAAAVAAHAMFAADVRRAEETIERRNADQGRRNRCGAGVLPY
ELLAPSSPPGVTCRGVPNSISI
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgccatggagggagctcaccggcctccggcgggcggcggccgcggcagcgagg
ccgccggtgccggggcgccggtgcgccaacgagctctgcctcgcgccgttccaccaccgc
gctccgcggcagcagcagcaggaggggaggaggaggaggcagctgcggcggggcgtcaag
gcggtggcggccatcagcgaggatctgccgaggctcgcggcgccagggacgaagggcgct
cgggccccggagaaggtgctgatgcgggcggcgctgacggtgcgccggaagcagaaggag
gacctcaaggaggcgctcgccggccacctcgacgcgctccgggacatggtcggcctgaac
gtcgcgctcgagctcatcagcaccaagatccaccccaggaccaagaagccgatgcagagc
ggccaggcatcgatcaaggactggtgccaaaagaggggcagcaagggagaacacgtcgtg
tacactgcagagttcatggtggattcagacttcggcgagcctggagcgatcaccgtggcc
aaccggcaccaccgggagttcttcctggagagcatcgtcgtggagggcgggctgctgtgt
gggccggtgcacttcgcctgcaactcctgggtgcagtccaccagggaactgcaggccaag
agggtgttcttcagcaacaagccatatttaccatctgaaacaccacctgggcttagagac
ctaagggataaggagctgaaggacctgagaggagatggcacaggagtgcgaaagttatgt
gacagaatatatgactatgcgacatacaatgatttggggaacccagatcgggggaaagag
ttcatcaggccaatccttggaggcgagaaaatcccttacccgcggcgatgccgtactggt
cgtccaccaactgataccagcatgctggctgagaacagagtagagaaaccgcatcggata
tacgtacctcgggatgaggcatttgaggagctgaagcagggagccttctcagcaggaagg
ctccgggcagtacttcacacccttatcccatcgatgatcgcaaccatctcagctgagacc
cacaactttcaaggcttccaccacgttgataatctctacaaggagggtctcaggctgaag
ttgggtctccaggagcacctattccagaagataccccttgttcaaaagattcaggaatca
agtgaggggatgcttcgctatgatacacctagcatcctttccaaggacaagtttgcatgg
ctccgtgatgacgagtttgctcggcagattgtggcaggaataaacccagttaacattgag
aggctcacggttttcccaccagtgagcaagctggatcctgcaatctatggatcaccagaa
tcatcgattaaagaagcagacatcacttgtcacctcaatggactcacagtacaacaggca
atggacgaggcaaagctgttcatattaaactaccatgatatctacctgccgttcttggac
cggattaatgcgatagagggaaggaaggcatatgcaacccggacaattttgttccttacc
caagttggcacattgaaaccaattgctattgaacttagtcttcctccaagccagccaggc
cagcctcggccaagcaaggtcctgacccctccctgtgatgctaccaccaactggctctgg
atgcttgccaaagctcatgtcagctccaatgacgccggcgttcatcagcttgtaaaccac
tggctgaggacacatgctattatggagccgttcatcttggcagcgcaccggcgaatgagc
gcaatgcacccaatcttcaagctcctgcacccccacacgcggtacacgctggagatcaat
gcgcttgcccggcagagcctgatcagcgcggatggcgtcatcgaatcctgcttcacccct
ggccctgtctccggcgagatcagcgctgcatactaccgcgaccactggcggttcgacctt
gagggccttccttctgacctcgtccgcaggggagtggccgtggaggacgcttcgcagcct
cacggcatcaggctcctcatcgaggactacccttacgccaacgacgggctcctgctgtgg
tcggccattcgcagctgggtcgagtcgtacgtgcagctctactacccggatgccggcacg
gtgcagtccgacgacgagctccaaggatggtaccacgagacggtccatgtcggccacgcc
gacatccagcacgcgccctggtggccgacgctctccacgccggacggcctcgcgtccatc
ctcacgacgctcatctggctggcgtcggcgcagcacgcggcgctcaacttcgggcagtac
ccgctgggcgggtacgtccccaaccgccccccgctgatgcggcggctgctgccggacccg
gagcgcgacgcggccgagtacgcggcgttcctggcggacccgcaccgcttcttcttgaac
gcgatgccgggggtgctggaggccaccaagttcatggcggtggtggacacgctgtcgacg
cactcgcccgacgaggagtacctcggggaggggcgcgacgagccgtggacgggcgacgcg
gccgccgtggcggcgcacgccatgttcgcggccgacgtgcgccgcgccgaggagaccatc
gagcggcgcaacgcggaccagggcaggaggaaccggtgcggcgccggcgtgctgccgtac
gagctgctggcgcccagctcgccgccgggggtcacgtgccgcggcgtgcccaacagtatc
tccatatga
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