Panicum virgatum (switchgrass): 120647541
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Entry
120647541 CDS
T07260
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase-like isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00280
Valine, leucine and isoleucine degradation
pvir00650
Butanoate metabolism
pvir00900
Terpenoid backbone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120647541
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120647541
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120647541
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
120647541
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GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III_C
Motif
Other DBs
NCBI-GeneID:
120647541
NCBI-ProteinID:
XP_039780301
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Position
9K:complement(70066593..70075007)
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AA seq
464 aa
AA seq
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MAAEAKDVGILAMDIYFPPTCVLQEELETHDGVSKGKYTIGLGQDSMAFCTEVEDVISMS
LTVVKSLLKNYNIDPKCIGRLEVGSETVIDKSKSIKTWLMQIFEEYGNTDIEGVDSSNAC
YGGTAALFNCVNWVESNSWDGRYGLVVCTDSAVYAEGPARPTGGAAAIAMLIGPNAPISF
ESKYRGSHMAHAYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYNVFCKKYEKHEGKQFS
IFDADYVVFHSPYNKLVQKSFARLCYNDFLRNCSTVDEESREKLAPYAGLSSEESYQSRD
LEKESQQVAKKLYESKVQPTTLIPKQVGNMYTASLYAAFASVIYNRHETLAGQRIVMFSY
GSGLTSTMFSFKINEGQHPFSLLNIANILDISKKLEARHVVPPKKFVETLKLMEHRYGAK
DFVTSQDTSLLPAGIYYLTHVDSMYRRFYAMKDEGVTTAVSNGH
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggccaaggacgtgggcatcctcgccatggacatctacttcccgcccacc
tgcgtgctccaggaagagttggaaactcatgatggcgtgagcaaagggaaatacaccatt
gggcttgggcaggatagcatggcattttgcactgaagttgaggatgttatctcaatgagt
ttgacagtggtgaagtccctcctgaaaaattataacattgacccgaagtgcattggacgt
ttggaagttggcagtgaaacagtaatagacaagagcaagtctataaagacatggttgatg
caaatttttgaggaatatggcaacactgatattgaaggagttgactcctcaaatgcatgc
tatggtggaacagctgcgttgtttaattgtgttaactgggttgaaagcaactcatgggac
gggcgttatggacttgttgtttgcacagacagtgcggtttacgctgaaggtccggctcgt
cctactggtggtgcagctgctattgccatgctgattggaccaaacgctcctatttctttt
gaaagcaaatataggggatctcatatggcccatgcatatgacttttacaagcctgatctt
gcgagtgaatatccggtggttgatggaaagttgtcacagacatgctatctcatggcattg
gattcctgctataatgtattttgtaaaaagtatgaaaagcatgagggaaagcaattttca
atttttgatgcagattatgttgtattccattctccatacaacaagcttgtacagaaaagc
tttgctcgtttgtgctacaacgatttcttgagaaactgcagcacggttgatgaagagtct
agggaaaaattggcaccctatgctggtttgtcatctgaagaaagttaccagagccgagac
cttgaaaaggaatcccagcaagttgcgaagaaactgtacgagtccaaggttcagccaaca
acattgatcccaaaacaagttgggaatatgtatacagcatcgctctatgccgcttttgct
tcagttatctataatagacatgaaactctggcaggccagaggattgttatgttttcatat
ggaagtggcttgacatcaacaatgttctctttcaaaattaatgaaggccagcacccattc
agtctgctaaacattgcaaacatactggatatttccaagaagctggaggcaagacatgtg
gttcccccgaagaaatttgtcgagacactgaaattgatggagcaccgctatggggcaaaa
gatttcgtgaccagtcaggacacaagtttgctacctgcaggcatatattatctcacccac
gtcgattccatgtaccgaaggttctacgccatgaaagacgagggtgtcaccactgcagtg
tccaatgggcactga
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