Panicum virgatum (switchgrass): 120648869
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Entry
120648869 CDS
T07260
Name
(RefSeq) lipoxygenase 2.3, chloroplastic-like
KO
K00454
lipoxygenase [EC:
1.13.11.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00591
Linoleic acid metabolism
pvir00592
alpha-Linolenic acid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00113
Jasmonic acid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00591 Linoleic acid metabolism
120648869
00592 alpha-Linolenic acid metabolism
120648869
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.12 linoleate 13S-lipoxygenase
120648869
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Gene cluster
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Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
120648869
NCBI-ProteinID:
XP_039781446
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Position
1K:complement(8056642..8060365)
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AA seq
900 aa
AA seq
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MMHLNLKQPLAVLPGHQGNVVVGPSSPAPAAGARRVVGAASSGRRHVMPRISCSATEEIG
GAVSAATVEKMLTVKATVEASPAIGRVYAARGLDDIGDLLGKTLLLELVSSELDPKTGLE
KERVTAFAHRTLVEGRYEAEFQVPASFGPVGAVLVENEHHKETFIREIRLVTAGDPSSAV
TFDCNSWVHSKFDNPEKRIFFTLKSFLPSETPKGLEELRKKDLEALRGDGRGERKAFERV
YDYDVYNDLGDPDRNPGHRRPVLGGSAEFPYPRRCRTGRARAATDPRAERRDGHNYVPRD
EWFSEVKQLTFGATTLRSGLHALLPMLRPMLTEKELRFPHFPAIDDLYSDGLPLPPETGF
DAIRTVVPRMVRMVEDTTDHVLRFEIPGMVERDRFSWFRDEEFARQTLAGLNPLCIQLLT
EFPIRSKLDPAVYGPAESAITREILEKQMSGNLTVEEALAARRLFILDYHDVFLPYVHKV
REQQEATLYGSRTVFFLTDLGTLMPLAIELTRPQSPTGQPQWRRVFTHGPDATDSWLWKL
AKAHVLSHDTGYHQLVSHWLRTHCCVEPYIIAANRQLSRLHPVYRLLHPHFRYTMEINAL
ARESLINADGIIEQAFWPGKYSVELSSVAYGATWRFDMEALPNDLVRRGLAVRRGGDGGE
LELTIKDYPYAHDGLLVWDSIRRWAADYVAVYYESDEAVAGDPELQAFWEEVRTVGHADK
KDEPWWPVLDTRRSLVETLTTIMWVTSGHHSAVNFGQYHYGGYFPNRPTTIRKKMPVEEG
RDEEMRKFMSQPEATLLDMLPTQMQAITVMTTLDILSAHSPDEEYMGEHAEPAWLAEPRV
KAAFEKFAGRIKEIEGVVDECNSNPELRNRCGAGIVPYELLKPFSKPGVTGRGIPNSISI
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacctgaacctgaagcagccactggcggtgctgccggggcaccagggcaatgtc
gtcgtcggcccgtcgtcgccggcgccggcggcgggcgccaggagggtcgtcggggcggcg
tcctccggccggcggcacgtcatgccgaggataagctgcagcgcgacggaggagatcggc
ggcgccgtgtcggcggccaccgtggagaagatgctgaccgtgaaggccacggtggaggcg
tcgccggccatcgggcgggtgtacgccgcccgcggcctcgacgacatcggcgacctcctc
ggcaagacgctgctcctcgagctcgtcagctccgagctcgacccgaagacgggcctggag
aaggagcgtgtgacggcgttcgcgcaccggacgctggtggagggccggtacgaggcggag
ttccaggtgccggcgtcgttcgggccggtgggcgctgtgctggtcgagaacgagcaccac
aaggagaccttcatccgcgagatcaggctcgtcaccgccggcgaccccagctccgccgtc
accttcgactgcaactcctgggtgcactccaagttcgacaaccccgagaagcgcatcttc
ttcaccctcaagtcgttcttgccgtcggagacgcccaagggcctggaggagctgaggaag
aaggacctcgaggcgctgcgcggcgacgggcgcggcgagcgcaaggccttcgagcgcgtc
tacgactacgacgtgtacaacgacctcggcgacccggaccggaaccccggccaccggcgc
cccgtgctcggcggcagcgccgagttcccctacccgcggcggtgccgcaccggccgcgcc
cgggccgcgacagacccgcgggcggagcgccgggacggccacaactacgtgccccgcgac
gagtggttctcggaggtgaagcagctcaccttcggggccaccacgctgcgctcgggactg
cacgcactgctccccatgctgcgcccgatgctgaccgagaaggagctccggttcccgcac
ttccccgccatcgacgacctctacagcgacggcctcccgctgccgccggagaccggcttc
gacgccatccgcaccgtcgtgccgcgcatggtcaggatggtcgaggacaccaccgaccac
gtcctccgcttcgagatccccggcatggtggagagggaccggttctcgtggttcagggac
gaggagttcgcgcggcagacgctggcggggctcaacccgctgtgcatccagctgctgacc
gaattccccatcaggagcaagctggacccggcggtgtacggcccggcggagtccgccatc
accagggagatcctcgagaagcagatgagcggcaacctcaccgtcgaggaggcgctggcg
gcgaggcggctcttcatcctcgactaccacgacgtgttcctgccctacgtgcacaaggtg
cgggagcagcaggaggccacgctctacggctcccgcaccgtcttcttcctcaccgacctg
ggcaccctcatgccgctggccatcgagctcacgcggccgcagtcgccgaccgggcagccg
cagtggcggcgggtgttcacgcacgggcccgacgccaccgactcctggctctggaagctg
gccaaggcgcacgtgctcagccacgacaccggctaccaccagctcgtcagccactggctg
cgcacccactgctgcgtcgagccctacatcatcgccgccaaccggcagctcagccggctg
caccccgtgtaccggctcctgcacccgcacttccgctacaccatggagatcaacgcgctg
gcccgggagagcctcatcaacgccgacggcatcatcgagcaggccttctggccgggcaag
tactccgtcgagctcagctccgtcgcctacggcgccacgtggcggttcgacatggaggcg
ctgcccaacgacctcgtccggcgcgggctcgccgtgcgcaggggcggcgacggcggcgag
ctggagctcaccatcaaggactacccctacgcccacgacgggctcctggtctgggactcc
atcaggcggtgggcggcggactacgtcgccgtgtactacgagtccgacgaggccgtcgcc
ggcgaccccgagctgcaggcgttctgggaggaggtgcgcacggtggggcacgccgacaag
aaggacgagccgtggtggcccgtgctcgacacccgccgcagcctggttgagacgctcacc
accatcatgtgggtcacctccggccaccactccgccgtcaacttcgggcagtaccactac
ggcggttacttccccaaccgccccaccaccatccggaagaagatgccggtggaggagggc
cgggacgaggagatgaggaagttcatgtcgcagccggaggcgacgctgctggacatgctg
cccacgcagatgcaggccatcacggtgatgaccacgctggacatcctctccgcgcactcc
cccgacgaggagtacatgggcgagcacgccgagccggcgtggctggcggagcccagggtg
aaggcggcgttcgagaagttcgccggcaggataaaggagatcgagggcgtcgtcgacgag
tgcaacagcaacccggagttgaggaaccgctgcggcgccgggatcgtgccgtacgagctg
ctcaagcccttctccaagccgggggtcaccgggaggggcatcccaaacagcatctccatc
tga
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