Panicum virgatum (switchgrass): 120649480 Help Entry 120649480         CDS       T07260                                  Name (RefSeq) 5'-3' exoribonuclease 4-like   KO K20553   5'-3' exoribonuclease 4 [EC:3.1.13.-] Organism pvir  Panicum virgatum (switchgrass) Pathway pvir04016   MAPK signaling pathway - plant Brite KEGG Orthology (KO) [BR:pvir00001]  09130 Environmental Information Processing   09132 Signal transduction    04016 MAPK signaling pathway - plant     120649480  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pvir03019]     120649480 Messenger RNA biogenesis [BR:pvir03019]  Eukaryotic type   mRNA degradation factors    5'-3' decay     5' exonucleases      120649480 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  XRN_M XRN_N zf-CCHC Motif Other DBs NCBI-GeneID:  120649480 NCBI-ProteinID:  XP_039782216 LinkDB All DBs Position 9K:complement(4248971..4257862) Genome browser AA seq 988 aa AA seqDB search MGVPAFYRWLADRYPLTVSDAEEEPVELEPGAFVPVDLRRPNPNGLEFDNLYLDMNGIIH PCFHPEGRPAPTTYDEVFKSIFDYIDHLFGIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR AAKDAADAAAEEERLRKEFEAEGRTLAQKEKSEAIDSNVITPGTQFMFVLSTALQYYIQL RLNHTLGWQSVKVILSDSNVPGEGEHKIMSYIRLQRNLPGFDPNTRHCLYGLDADLIMLA LATHEIHFSILREVISMPGQQEKCFLCGQVGHLAAECRGPSQADNSVELPPIHKKKYQFL NIWVLREYLAKDLEIVDAPFKINFERLIDDFVFMCFFVGNDFLPHMPTLEIREGAINLLM SIYRAEFTSMGGYLTDGGEVLLDRVQHFIQSVAVNEEQIFQKRAHIQQARENYEERNKIQ KENSEENQYVDKVKLGEPGYRERYYAEKFKEEAESKPIAQVRRDVVQKYVEGLCWVMRYY YQGVCSWQWFYPYHYAPFASDLKDLAELEITFFLGQPFKPFDQLMGTLPAASSNALPKYY GDLMTDPNSPLSSFYPKDFEIDMNGKRFAWQGVAKLPFIDEMRLLAETRKLEDTLTEEEK FRNRTMFDIIYVRDSHPLTAQIVFLYQMYNHLPRTDPYVVPIDPAASGGMNGFLCLSERN WYCITVTSPVKGFNGIAQNRVLNATYLNPQYHKHIPEPPMGVIIPAKILKPSDFKPFPVL WHEDNSRRQARDRPQVSGALSGSLLGEAAHRLVKNSLQIKSGSAAGLLDMPYRGAPYGPG NRPRPAGPLGYERGFVDNSYHAHMSRSVPNSHPQFFGDAQANRQPMWILERPNSRSHEAG IRASMSKLTIHEGPRPHQNNRMQNSGYWPNQPHPNHYPGPPPQPPMQNINFTPQRPFQTG GFPQQRPVNGVPPPLPPSNWIGKQPSGCPMGVPAKHDPRTVPDRQPKQDNPRSQQDKKQQ ATKVYRVKTQATNGNGLSESGKQEEPTA NT seq 2967 nt NT seq  +upstreamnt  +downstreamnt atgggagtcccggcgttctaccggtggctggcggaccgctacccgctgaccgtgtcggac gcggaggaggagcccgtggagctcgagcccggcgccttcgtccccgtcgacctccgccgc cccaaccccaacggcctcgagttcgacaacctctacctcgacatgaatggcatcattcac ccctgcttccaccccgaaggccggccggcgcccaccacatacgacgaggtgttcaagtcg atttttgattacatcgaccacctcttcggcatcgtccgccccaggaagctcctctacatg gcaattgatggtgttgctccaagggcgaaaatgaatcagcagaggtccaggagattccgg gcggcaaaggacgcggctgatgcggcagccgaggaggagaggctgaggaaggaatttgag gcagagggtaggactctagcccagaaagagaagtcggaggcaattgactcgaacgtcatt actcccgggacacagttcatgtttgtactatctacggcgcttcagtactacatacaattg agattaaatcatacccttggatggcagtctgtcaaggtaatattgtctgattccaatgtc cctggagagggagagcacaaaattatgtcatacatccgcctgcagcgcaatcttcctgga tttgatcccaatacacgccattgcttatacggcctcgatgctgatttgattatgcttgca ctggcaactcatgagatccacttctcaattttaagagaggtgatctccatgccagggcaa caagaaaaatgttttctgtgcggtcaagttgggcatttggctgctgaatgcagaggccct agccaggctgataattctgtggagctacctcctattcataaaaagaagtaccagtttctt aacatatgggtgctgcgtgaatacctggcaaaggatttggaaattgtagatgctcccttc aagataaactttgaacgccttatcgatgattttgtgtttatgtgtttctttgttggcaat gactttctgcctcacatgccaactttagaaattcgtgagggtgctattaaccttctcatg agtatctacagggcggagttcacatcaatgggtggctacctcaccgatgggggcgaggtt ctattggaccgagtgcaacacttcattcagtctgttgctgtcaatgaagaacaaattttc cagaaacgtgcacacattcaacaggcacgtgagaactatgaagagagaaacaaaatacag aaggaaaattctgaggagaatcaatatgtggacaaggtcaagttaggagagccaggatac agggagcggtactatgcagagaaatttaaagaagaggcagaatcaaaacctattgctcaa gttcggagagatgttgtccagaaatatgtggaaggtctttgttgggttatgagatactac tatcaaggtgtttgttcatggcagtggttctatccatatcattatgcgccttttgcatct gacttaaaagacttggctgaattggagataacatttttcttgggtcaacctttcaagcca ttcgatcaactcatggggacactaccagctgcaagctccaatgcactgccaaagtactat ggtgatttaatgactgatccaaattcacctttgagttcattctatcccaaagattttgag atagacatgaacggtaaacgttttgcatggcagggtgttgcaaaattgccttttattgac gaaatgcgtttgcttgctgagacaagaaaactagaagatacattgacagaagaagagaaa ttcaggaacaggacaatgtttgacatcatatatgttcgggactctcatccattgactgct cagattgtgttcctgtatcaaatgtacaaccatctaccaagaacagatccttatgttgta cccattgaccctgctgctagtggtggaatgaatgggttcctttgtttatctgaaaggaac tggtattgcatcactgtaacatctccagttaaagggttcaatggcattgcccaaaacaga gttttgaatgctacctaccttaatcctcagtatcacaagcacatcccggagcccccaatg ggggtcatcatacccgcaaagatattgaaacctagtgatttcaaaccctttcctgtattg tggcatgaagataatagtcgccggcaagcaagagacaggcctcaggtttctggagctctg tcaggttctctcttaggagaagctgcacaccgtctggtgaaaaactccctccagatcaaa tctggcagcgctgctgggctacttgatatgccttatagaggtgcaccctatggccctgga aacagaccaaggcctgccggaccattaggatatgagaggggttttgtggacaattcatac catgcacacatgtccagaagtgtcccgaactctcaccctcaattcttcggtgatgctcaa gctaacagacagcctatgtggatactggaacgtccaaactcccgaagccatgaagctggt atccgtgcatcaatgtcaaaactgacaatccatgaagggccaaggccacatcagaataac aggatgcagaattccgggtactggcccaatcaaccacatcctaatcactatcctggaccc ccaccccagccgcccatgcagaacatcaattttacacctcagcggcctttccaaactgga ggattcccgcagcagcgaccagtaaatggggttccaccaccattacctcccagtaactgg attggcaagcaaccaagtggatgccccatgggtgtacctgcaaagcatgatccgaggaca gtcccggataggcagccgaagcaggataacccaagatcacaacaggataagaaacagcag gctaccaaggtttaccgtgtcaaaacccaagctactaatggtaatggtctgtcagagtca ggtaaacaggaagaacccacagcataa

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