Panicum virgatum (switchgrass): 120649508
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Entry
120649508 CDS
T07260
Name
(RefSeq) probable glutamate carboxypeptidase VP8 isoform X1
KO
K01301
N-acetylated-alpha-linked acidic dipeptidase [EC:
3.4.17.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120649508
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.21 glutamate carboxypeptidase II
120649508
Peptidases and inhibitors [BR:
pvir01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
120649508
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Gene cluster
GFIT
Motif
Pfam:
TFR_dimer
Peptidase_M28
PA
Motif
Other DBs
NCBI-GeneID:
120649508
NCBI-ProteinID:
XP_039782255
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All DBs
Position
9K:complement(4510668..4518001)
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AA seq
713 aa
AA seq
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MPHAVLARLPPGSVRLVIAFGLLLLFSLLVLRRRPAGPPAKAAAARLPVRDPAALFLSLS
AGGNASIAADLRALTAGPHLAGTPAAGPAAAHVLGRLRAAGLQTLTREYAPLLSYPGRAS
SLALLRSDGSPLARLSLEEPADEGRRLVPPYHAYAPSGGAVAEAVFVNLGREEDYAALER
LGVGVRGRVAVARRGGGYRGGVVARAAEKGAVAVLIAGRADGGVERGVVLLGGPGDPLTP
GWAAAGGAERLGFDDEAVKRRFPKIPSMPVSAETALAIIRSLGGPSIPAEWQAGLGVDAG
GVGPGPTLVNFTYQEDRKFEKIHDIFGVIKGSQEPDRYVILGNHRDAWTYGAVDPNSGTA
SLLDIARRLGIMLQSGWKPRRSIILCSWDAEEFGMIGSTEWVEENLADLQSKAVAYLNVD
CAVQGVGFFAGSTPQLDKLLVDITRQVKDPDVMGKMVHDTWNEMNGGISIERLARTDSDF
APFLHHAGIPSVDLYYGKEFPGYHTALDSYNWMEKHGDPLFLRHLAITEIWGLLALRLAD
DPVLPFDYQVYASQLQEHTNALSALMNNSQAVNLMNGFISDLSDAAMEVLKEAQKLQQVD
LYDEHARIRRRVLNDRLLLAERSFLQAEGLKGRGWFKHLLYSPPEDYESKLSFFPGIADA
ISRSGNLSAKEREVAIRHEVWKVSRAIQRAARVLRGEFSRQSEQSKFSSVVTP
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacgctgtcctggcccgcctgcccccgggctccgtccggctcgtcatcgccttc
gggctgctgctcctcttctcgctgctcgtcctccgccgccgccccgcgggaccgccggcg
aaggccgccgccgcccgactccccgtccgtgaccccgccgcgctcttcctctcgctgtcc
gcggggggcaacgcgagcatcgcggccgacctccgcgcgctcaccgcggggccgcacctc
gcggggacgcccgcggcgggccccgccgccgcgcacgtgctcgggcggctccgcgccgcg
gggctccaaaccctaacgcgcgagtacgcgccgctgctctcgtaccccggccgcgcctcc
tccctcgcgctgctccggtccgacgggtccccgctcgcgcgcctgtcgctggaggagccc
gccgacgaggggcgccgcctcgtgccgccctaccacgcgtacgcgccgtccggcggggcc
gtcgcggaggcggtgttcgtcaacctcggccgcgaggaggactacgccgcgctcgagagg
ctcggggtgggcgtgcgcggccgcgtcgccgtggcgcggcgcgggggcgggtatcggggc
ggggtggtggcgcgggcagcggagaagggcgccgtcgccgtgctcattgcgggacgcgcg
gacgggggcgtagagagaggcgtcgttctgctcggcggccccggggacccgctcaccccc
gggtgggcagccgccggcggggctgagcgtttggggttcgacgatgaggcagtcaagcgg
cgcttccccaagatcccctcaatgccggtgtcggccgaaacggcgttagcaatcattcga
agccttggcggcccctccataccggcggagtggcaggccgggctcggggtggacgccggt
ggcgttggaccgggccccacattggtcaacttcacgtatcaggaggacaggaagtttgaa
aagatacatgacatttttggtgtcataaaagggtctcaagaacctgaccgttacgtgata
cttggtaaccacagagatgcatggacttatggagcagttgaccctaacagtgggacagct
tcacttcttgacattgctcggcgtcttggaataatgctgcagtcaggatggaaaccgcgg
aggtccatcattctttgtagctgggacgctgaagagtttgggatgattggatcaactgaa
tgggtcgaagagaacctcgcagatctgcagtcgaaagctgtagcttacttgaatgttgat
tgtgctgtgcaaggtgtggggttttttgctggctctactcctcaattggacaaactcttg
gttgatattacaagacaggtaaaggatccggacgtcatgggaaagatggttcatgataca
tggaatgaaatgaatggcggcatcagtatagaaagacttgccagaactgattctgacttc
gctccatttctacatcatgctggaattccctctgtagacttgtactatggaaaagaattt
cctggttaccacactgctctcgactcttataattggatggaaaagcatggagatccattg
tttcttcgtcatttggctatcacagaaatttggggactgttagcccttcgcttggcagat
gatcccgtcctaccttttgattatcaggtttacgcttcacaattacaggagcatacaaat
gcactttctgccctgatgaataatagtcaagcagtcaatttgatgaatggattcatcagt
gatctttctgatgcagctatggaagttctgaaggaggcgcagaaacttcagcaggtagat
ttatatgatgagcacgctaggataagaaggcgagtgttgaacgatcgcctcctgcttgct
gaaagaagcttcttgcaggcggaagggcttaaaggaagaggatggttcaagcacctgctg
tactcacctccggaggactacgaaagcaagctatcattcttccctgggatcgcggacgcc
atctctcggtcgggcaacctgagtgccaaagaacgagaggtggcaattcggcatgaagtg
tggaaagtctcccgtgcaattcaaagggcggcgagggttcttagaggtgaattcagtagg
caaagcgaacagtcaaaatttagttccgtggtgactccatga
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