Panicum virgatum (switchgrass): 120650515 Help Entry 120650515         CDS       T07260                                  Name (RefSeq) 4-coumarate--CoA ligase-like 1   KO K01904   4-coumarate--CoA ligase [EC:6.2.1.12] Organism pvir  Panicum virgatum (switchgrass) Pathway pvir00130   Ubiquinone and other terpenoid-quinone biosynthesis pvir00940   Phenylpropanoid biosynthesis pvir01100   Metabolic pathways pvir01110   Biosynthesis of secondary metabolites Module pvir_M00039   Monolignol biosynthesis, phenylalanine/tyrosine => monolignol pvir_M00137   Flavanone biosynthesis, phenylalanine => naringenin Brite KEGG Orthology (KO) [BR:pvir00001]  09100 Metabolism   09108 Metabolism of cofactors and vitamins    00130 Ubiquinone and other terpenoid-quinone biosynthesis     120650515   09110 Biosynthesis of other secondary metabolites    00940 Phenylpropanoid biosynthesis     120650515 Enzymes [BR:pvir01000]  6. Ligases   6.2  Forming carbon-sulfur bonds    6.2.1  Acid-thiol ligases     6.2.1.12  4-coumarate---CoA ligase      120650515 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AMP-binding AMP-binding_C Motif Other DBs NCBI-GeneID:  120650515 NCBI-ProteinID:  XP_039783600 LinkDB All DBs Position 9K:complement(17731989..17737873) Genome browser AA seq 546 aa AA seqDB search MADTASPAAGYGSDGVYRSPRPAARNASDATLSLPDLVLRRAAAFPSAPALVDAATGRAL TFEALRAAVLATAAALSSRARVRRGDVVLLLAPNCVLYPVCFLAVTALGAVATTANPRYT SREIARQVADASAKLVVTVSELLPKIADLRLPAILLDGDGGASAPSDYASTVTLYSDLVA GVQETEYRRPPTRQSDTAALFYSSGTTGVSKGVVVTHGNFVAAATAATSDQDELGEGRNV FLCFLPMFHMFGMSFVTLAQLQRGNTVVVTARFDVDAVERHRVTYLVCAPPVMIALARHG TGGRHDLSSLRCIVSGGAPLGKDVMEAVAEKFPDAAIIQSYGMTETCGMISSEYPLKGRT REFGSTGALVSEVEAKIVDAKTMKHLPPNQLGEICVRGPNIMRGYFNNVQATEFTIKRGW LHTGDLGYFDERGQLYVVDRLKELIKYKGFQIAPAELEGLLLSHAEILDAVVIPYPDPEA GEVPIAYVVRSPNSSLSEVDVQKFIEKQVTYYKRLRKVTFVDSIPKSASGKILRRVLKAQ VRSSKL NT seq 1641 nt NT seq  +upstreamnt  +downstreamnt atggcggacacggcatcaccggctgcgggctacggctccgacggcgtgtaccgttcgcca cgcccggcggcacgcaacgcctccgacgcgacgctgtccctccccgacctcgtccttcgc cgcgccgccgcgttcccctccgcgccggcgctcgtggacgccgcgacgggccgcgcactc accttcgaggccctccgcgccgcggtgctcgccacggccgccgcgctgtcctcccgcgcg cgcgtccgccgcggcgacgtcgtgctcctcctcgcgcccaactgcgtgctctacccggtc tgcttcctcgccgtcaccgcgctcggcgccgtcgccaccacggccaacccgcgctacacc tcgcgggagatcgccaggcaggtggccgacgccagcgccaagctcgtcgtcaccgtctcc gagctcctgcccaagatcgccgacctccgcctccccgccatcctcctggacggcgacggc ggcgcctccgcgccttcggattacgccagcaccgtcaccctctactcggacctcgtcgcc ggggtgcaggagacggagtaccgccggccgccgaccaggcagagcgacacggcggcgctg ttctactcgtcgggcactacgggggtgagcaagggcgtcgtggtcacccacggcaacttc gtcgcggcggcgacagcggcgacgtcggaccaggacgagctcggggaggggcgcaacgtg ttcctctgcttcctgcccatgttccacatgttcggcatgtccttcgtcacgcttgcccag ctgcagcgcggcaacaccgtcgtcgtgacggcccgcttcgacgtcgacgccgtggagcgg caccgcgtcacctacctcgtctgcgcgccgccggtgatgatcgcgctcgccaggcatggg acgggcggcaggcacgacctcagctctctcaggtgcatcgtctccggcggcgcgccgctc ggcaaggacgttatggaggccgtggcagaaaaattccccgacgccgcgattatccagagc tatggtatgactgaaacctgtgggatgatatcgtcggagtacccgctaaagggacgtacc cgtgagtttggttcaactggagcacttgtcagtgaagtggaagcaaagattgtcgatgcg aagacaatgaagcatctgcctccgaatcaactaggagaaatctgtgttcgtggaccaaac ataatgcgaggatatttcaacaatgtgcaagctactgagttcacaatcaagcgaggatgg ttgcatactggtgaccttggatactttgatgagagaggccaactttatgttgtcgataga cttaaagagctgattaagtacaaaggtttccagattgctccagctgagcttgaaggattg cttctgtctcatgcagaaattcttgatgctgttgtcatcccgtatcctgatcctgaagcg ggggaagttcccattgcctatgttgtacgatcgcctaacagttcactgtctgaagttgat gtccagaaatttattgaaaagcaggtcacgtattacaagagattgaggaaagttacgttt gtggacagtataccaaaatctgcttcaggaaaaattttgagaagagtgctcaaagcccaa gtcagatcatctaagctgtag

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