KEGG   Panicum virgatum (switchgrass): 120652509
Entry
120652509         CDS       T07260                                 
Name
(RefSeq) U11/U12 small nuclear ribonucleoprotein 65 kDa protein-like
  KO
K13157  U11/U12 small nuclear ribonucleoprotein 65 kDa protein
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120652509
Spliceosome [BR:pvir03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    120652509
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 120652509
NCBI-ProteinID: XP_039786297
LinkDB
Position
9K:56015064..56019483
AA seq 462 aa
MASFPPPHAFPPAPTAPYPATLPPLQQHHHQQPGPSPAGAATLLVRHLPEAITQDMLSRL
FSHYGATSVRPCAGGKLRNCAFVDFRDEAAANYAHSLLNRLRFLGKVLIVERANQPNTNN
AHVKPQDQLVHGVSQVPTIDAQNQKNPTSTAEPIAPKLGVDYSFPPHLEYAYPPPDGNIL
TNIVNALIAVPRFYTQVLHLMNKMNLPAPFRMALPTPPLPSQVPAPPHPPPPPQPEEPRS
ADLSSDESELESSDDDVDKRKSKRAKHEAIVGPAVDKNVAHEAVGVKPAALVSTELQVIK
KKNPVLQIKIAPKTAQKEPPVQSTADKEIDSTNEQLEEKHFVSPQEIEKDKLPPEEVLSL
PMFKNYTPGNPASVLYIKNLAKDVTHDDFFYVFGSLFESMDSVRSGLSIKLMQEGRMRGQ
AFVTFPTIELAQRALNLAHGYVFKGKPMIIQFGRNPTANKAS
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggcgtccttcccgccgccgcacgcgtttcctccagcaccaacagcaccataccccgcg
actctgccgcctctccagcagcaccaccaccagcagcccggtccctctccggcgggggcg
gcgacgctgctggtgcggcacctcccggaggcgatcacgcaggacatgctctcccgcctc
ttctcccactacggggccacgtccgtgcgcccctgtgccggtggaaagctgaggaattgt
gcatttgtagattttagggatgaggccgcggccaattatgcacattcgttactgaacagg
ttgaggttcctcgggaaagtgttaatagttgagagagcaaatcagccaaacacaaataat
gcacatgtgaagcctcaggaccaattagtgcatggggtgtcccaggtaccaactattgat
gcccagaatcagaagaatcctacatcgactgctgaaccaattgctccaaagcttggtgtg
gactattcatttcctcctcaccttgagtatgcatatccaccaccagatggaaacatattg
acaaatattgtcaatgccctcattgccgtccctcgattctacacccaggtgttgcactta
atgaacaagatgaaccttccagctccatttcggatggcattgcctactccaccgctacca
tcacaagtgcctgctccccctcatcctccgccaccaccacaacctgaggaacctcgttca
gctgatttgtctagcgatgagtctgagttggaatcatctgatgatgatgttgataaacgg
aaaagcaagcgtgccaagcatgaagctattgttggtcctgcagttgataaaaatgttgct
catgaagctgttggggtaaaacctgctgcattggtttctactgagcttcaagtgatcaaa
aagaaaaacccagtactccagataaaaattgcccctaagactgcgcagaaggaaccacct
gtacaaagtacagctgacaaggaaatcgattcaacaaatgaacagcttgaagagaaacat
tttgtctcaccccaggaaatagagaaagataaattaccaccagaggaggttttgtccctt
cctatgttcaagaattacactccaggaaatcctgcctctgttttgtacattaagaacttg
gcgaaggatgtcactcatgatgacttcttctatgtctttgggtctcttttcgaaagtatg
gacagtgtaagatcgggtctaagtatcaagttgatgcaggagggacggatgcgtggtcaa
gcctttgtgacatttcctactattgaactcgctcaacgagctctgaatctagctcatggc
tatgtgttcaaaggaaaaccaatgatcatacaatttggtagaaatcctactgctaataaa
gcttcctag

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